Pseudomonas synxantha LBUM223: VO64_1395
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Entry
VO64_1395 CDS
T03769
Name
(GenBank) heme uptake regulator
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pfb
Pseudomonas synxantha LBUM223
Pathway
pfb02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VO64_1395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfb03021
]
VO64_1395
Transcription machinery [BR:
pfb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
VO64_1395
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_23
PhyR_sigma-like
GerE
HTH_11
HTH_40
HTH_28
HTH_29
HTH_Tnp_ISL3
HTH_24
DUF722
Phage_antitermQ
Terminase_5
Phage_NinH
DKCLD
Motif
Other DBs
NCBI-ProteinID:
AKA81941
LinkDB
All DBs
Position
1552769..1553479
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AA seq
236 aa
AA seq
DB search
MWAASYTKNPQCLDLNALYFKYFLDPRLTRIKTGFCSCKRESIAFTQRLAAQLKTILNNA
RATPMPVGEPPFQREITQLYNEHHGWLLTWLRRKLGCRQNAADLAQDTFARILNARETVA
GIREPRAYLSTTARRLLIDQARRRQIEQAYLQELALTVDALEGVQSPEQIHTTLEALEQI
AFILEGMHEYSRQAFVLYYLEELTQQQIARQLKLSERTVRKYLIKALMHCSHSMDT
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
gtgtgggcggcatcatacaccaaaaatccgcaatgtcttgatttaaatgcactttatttt
aaatattttcttgacccaaggttaacccgaataaaaacgggcttctgctcctgtaaacgc
gagtctattgcgtttacccagcgcttggctgcacaattaaaaaccattctcaataacgcc
cgagccacgcctatgcctgtgggtgaaccgccattccaacgggaaattacccagctctac
aacgagcatcatggctggctgctcacttggctgcggcgcaagctgggttgccggcagaac
gccgccgatttggcgcaggatacctttgcacgcatcttgaacgcgcgtgaaaccgtggcc
ggcattcgcgaaccccgggcttacttgagcaccaccgccaggcgcctgcttatcgaccaa
gcgcgacgcagacagattgaacaagcttatctgcaggaattggccctcacggtggacgcg
ctcgaaggtgttcaatccccagagcaaatccacacaacgctcgaggcccttgagcagatt
gcgtttatcctggaaggcatgcacgaatattcacgccaggcttttgtgctgtattacctc
gaagaattgacccaacagcaaatcgcccggcagctcaaattgtcagagcgtactgtgcgc
aaatacctgatcaaggcgctcatgcattgcagccacagtatggacacctga
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