Pseudomonas synxantha LBUM223: VO64_1577
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Entry
VO64_1577 CDS
T03769
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pfb
Pseudomonas synxantha LBUM223
Pathway
pfb03420
Nucleotide excision repair
pfb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
VO64_1577
03430 Mismatch repair
VO64_1577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfb03400
]
VO64_1577
Enzymes [BR:
pfb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VO64_1577
DNA repair and recombination proteins [BR:
pfb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VO64_1577
MMR (mismatch excision repair)
Other MMR factors
VO64_1577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
Viral_helicase1
AAA_19
UvrD_C
UvrD_C_2
CSN8_PSD8_EIF3K
Motif
Other DBs
NCBI-ProteinID:
AKA82123
UniProt:
A0AAU8THJ8
LinkDB
All DBs
Position
complement(1755166..1756272)
Genome browser
AA seq
368 aa
AA seq
DB search
MNRLVIASAGSGKTNLIVKSAVDDAKAGKRVLITTFTEACEHEIRSKIIQLNGCVPASVD
IITWFSFLIRHGVKPFQGCLFNFDTKGMLLVSGRSGLKFQGEMFPVYWGEDDFEKFYFTE
DKRIYSDKLAQLVVRLQENSKGLVFERISRCYGKIYIDEVQDLAGYDLEVLDLLFKIDSD
VLLVGDPRQATYATNNSRKNKKYVKSAIVNFFLDERLGIDIDDTSLQVNHRCAPAICDYS
NKLFPSMNPATSGNRDVTGHDGVFLVVKEKLGQYLESFQPVQLRDSIKTETDSNYKSMNF
GKSKGLTLGRVLIYPSAPMVKWMCNNDTELTQAARSKFYVALTRAKNSVGIVVSKTEVKK
ITGLDVYE
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgattagtgatcgcttcagcagggtcgggaaaaactaatttgatagtgaaaagt
gcagtcgacgatgcaaaagctggtaagcgcgttttaatcacaacattcaccgaagcgtgt
gagcacgagattcgttcgaaaattatccagcttaatggatgtgtcccagccagtgttgat
attattacgtggttttcctttttgataaggcatggtgtaaagccttttcaggggtgtctt
tttaattttgataccaaaggcatgcttttggtaagtggaagatcagggttgaagtttcaa
ggtgaaatgttccctgtgtattggggggaggatgattttgaaaagttttattttaccgaa
gataaaagaatatattctgataagctggcccagcttgtagtaaggttgcaagaaaattca
aaggggttggtttttgaacggattagccgttgctatggaaaaatttatatagatgaagtg
caagacctggccggctacgaccttgaagtattggatttgctttttaaaatagattctgac
gtgctattggtaggtgatcccaggcaggcgacctatgctactaataactctagaaagaat
aagaagtatgtgaagtcagctattgttaatttttttcttgatgaaaggcttggtatagat
attgacgatacctctcttcaggttaatcatcggtgtgcccccgccatttgcgattattcc
aacaaacttttcccaagcatgaatcctgcgacctctggaaatcgagatgttacgggtcac
gatggagtttttttagtggttaaagaaaagttggggcaataccttgaatcttttcaaccg
gttcaattgcgtgacagcatcaaaacagagactgactcgaattataagtctatgaatttt
ggaaagtctaaagggctgaccctaggtcgtgtacttatttatccatccgcaccgatggtg
aaatggatgtgcaataatgacacagagttaacacaagctgcccgaagcaaattttacgtc
gctctaactcgagccaaaaatagtgttggtattgtagtgtcaaaaacagaagttaagaaa
atcacaggtttagatgtgtatgagtaa
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