Pseudomonas synxantha LBUM223: VO64_1669
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Entry
VO64_1669 CDS
T03769
Name
(GenBank) putative sigma-70 factor, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pfb
Pseudomonas synxantha LBUM223
Pathway
pfb02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VO64_1669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfb03021
]
VO64_1669
Transcription machinery [BR:
pfb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
VO64_1669
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
HTH_23
Sigma70_r4
HTH_28
GerE
HTH_24
Sigma70_ECF
HTH_29
HTH_10
Motif
Other DBs
NCBI-ProteinID:
AKA82215
LinkDB
All DBs
Position
complement(1858943..1859452)
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AA seq
169 aa
AA seq
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MSGADTSHRDYVGALFRSHYAWLCSRLYRQLDSRAHAEDIAADTFVQLLSALDVAPIRQP
RALLTTIAQRLMYQLWRRRDLERAYLDVLDNDEAFSVPSPENLAQTCEALKVVDQWLDGL
PAKVRATFLLSRLNGLTYPAIAAELGISPRSVSDYMARALNGRLRLRLE
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcgccgacacctctcaccgcgactacgtgggcgcactgttccgcagccattac
gcctggctgtgcagccgcctgtatcgtcaactcgattcccgtgcacacgccgaagacatc
gccgccgacacctttgtccagctcctgagcgcactcgacgtcgccccgatccgccagcct
cgcgccttgctcactaccattgcccagcgcctgatgtatcagctatggcggcgacgtgac
ctggagcgcgcctatctcgatgtcctggataacgatgaagccttcagcgtgccgtccccc
gaaaacctggcccagacgtgcgaggcgctgaaagtcgtcgaccagtggctcgacggcctg
ccggccaaggtcagggcgacgttcctgttgtcccgactcaatggcctgacgtatcccgcg
atcgccgccgaattgggaatttccccgcgctcggtcagtgattacatggcccgcgcgctt
aacggtcgcctgcggttgcgcctggaatga
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