Pseudomonas synxantha LBUM223: VO64_1683
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Entry
VO64_1683 CDS
T03769
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pfb
Pseudomonas synxantha LBUM223
Pathway
pfb00061
Fatty acid biosynthesis
pfb00071
Fatty acid degradation
pfb01100
Metabolic pathways
pfb01212
Fatty acid metabolism
pfb02024
Quorum sensing
pfb04146
Peroxisome
Module
pfb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
VO64_1683
00071 Fatty acid degradation
VO64_1683
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
VO64_1683
09145 Cellular community - prokaryotes
02024 Quorum sensing
VO64_1683
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pfb01004
]
VO64_1683
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pfb04147
]
VO64_1683
Enzymes [BR:
pfb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
VO64_1683
Lipid biosynthesis proteins [BR:
pfb01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
VO64_1683
Exosome [BR:
pfb04147
]
Exosomal proteins
Exosomal proteins of breast milk
VO64_1683
Exosomal proteins of breast cancer cells
VO64_1683
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Paralog
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GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF599
Motif
Other DBs
NCBI-ProteinID:
AKA82229
UniProt:
A0AAU8TJZ6
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All DBs
Position
complement(1870991..1872682)
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AA seq
563 aa
AA seq
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MNEDFWKDKYPAGIAAQINPDEYPNIQAVLKQSCQRFANKPAFSNLGKTITYGELYELSG
AFAAYLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAIRAGLIVVNTNPLYTAREMEHQFND
SGAKALVCLANMAHLAEKVVPKTAVKHVIVTEVADLLSPFKRLLINSVIKYVKKMVPAYH
LPQAIKFNDVLAKGHGQAVNDASPASSDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCK
ALMGSNLNEGCEILITPLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELSKWK
FSGFVGLNTLFVALCNNEGFRKLDFSALKVTLSGGMALQLAAAERWKAVTGCSICEGYGM
TETSPVATVNPIQNIQIGTIGIPVPSTVCKVIADDGTELALGETGELCVKGPQVMKGYWQ
REDATAEMLDSEGWLKTGDIAIIQPDGYMRIVDRKKDMILVSGFNVYPNELEDVLAGLPG
VLQCAAIGVPDEKSGEHIKLFIVVKPGATLTKDQVMEHMRANVTGYKVPKAVEFRDALPT
TNVGKILRRELRDEELKKLGVKK
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaagacttttggaaggataagtaccccgccgggattgctgcacaaatcaatcca
gacgagtatccgaatattcaggcggtactgaagcagtcctgccagcgcttcgccaacaaa
ccggctttcagcaacctgggcaagacaatcacctacggtgaactgtacgaattgtccggc
gccttcgccgcgtacctgcaacagcataccgacttgaagcccggcgatcgaatcgccgtg
caactgcccaacgtcctgcaatacccggttgccgtgtttggtgccatccgtgccggcctg
atcgtggtcaacaccaatccgctgtacaccgcgcgggaaatggaacatcaattcaatgac
tccggggccaaggctctggtctgcctggccaacatggcgcacctggctgaaaaggtcgtg
cccaagaccgccgtcaagcatgtgatcgtcaccgaagttgccgacctgctgtcgccgttc
aagcgtctgctgatcaacagcgtgatcaagtacgtgaagaagatggtcccggcctatcac
ttgccccaggcgatcaagttcaacgacgtgctggccaaggggcatggccaggcggtcaac
gacgccagtccggccagcagcgatgtggcggtgttgcaatacaccggcggcaccaccggc
gtggccaagggcgcgatgctgacccatcgcaacctcgtcgccaacatgctgcagtgcaag
gcgctgatgggctcgaacctcaatgaaggttgcgagatcctgatcacgccgctgccgctg
tatcacatctatgcgttcacctttcattgcatggcgatgatgctgatcggcaaccacaac
atcctgatcagcaacccgcgtgacctgccggcgatggtcaaggaactgtcgaagtggaag
ttcagcggttttgtcggcctcaacacgctgtttgtagcgctgtgcaacaacgaaggcttc
cgcaagctggatttctcagcgctgaaagtcaccctgtcgggcggcatggcgttgcaactg
gcagcggcagagcgctggaaggcggtgaccggctgcagcatctgcgaaggctacggcatg
accgaaaccagcccggtggccacggtcaacccgatccagaatatccagatcggtaccatc
ggcattccggtgccgtccacggtgtgcaaagtcatcgccgacgacggtaccgagctggcg
ctgggcgaaaccggcgagctgtgcgtcaagggcccgcaagtgatgaagggctactggcag
cgcgaagacgccacggccgagatgctcgacagtgaaggctggttgaagactggcgacatc
gcgatcatccagcccgatggctatatgcgcattgtcgaccgcaagaaagacatgatcctg
gtctccggcttcaacgtctaccccaacgagctggaggacgtgctggccggtttgccgggg
gtactgcaatgcgcagccatcggcgtaccggatgagaaatccggggagcacatcaagctc
ttcatcgtggtcaagccaggggccaccctgaccaaggaccaagtcatggagcacatgcgc
gccaacgtcaccggctacaaggtgcccaaggccgtggagttccgcgatgcactgccgacc
accaacgtgggcaagatcctgcgtcgcgaactgcgtgatgaagagttgaaaaaactgggc
gttaaaaaatag
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