Pseudomonas synxantha LBUM223: VO64_1777
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Entry
VO64_1777 CDS
T03769
Name
(GenBank) Outer membrane porin, OprD family
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
pfb
Pseudomonas synxantha LBUM223
Pathway
pfb01501
beta-Lactam resistance
pfb02020
Two-component system
Module
pfb_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VO64_1777
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VO64_1777
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfb02000
]
VO64_1777
01504 Antimicrobial resistance genes [BR:
pfb01504
]
VO64_1777
Transporters [BR:
pfb02000
]
Other transporters
Pores ion channels [TC:
1
]
VO64_1777
Antimicrobial resistance genes [BR:
pfb01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
VO64_1777
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
AKA82323
UniProt:
A0AAU8TIK9
LinkDB
All DBs
Position
1972938..1974218
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AA seq
426 aa
AA seq
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MRVMKWSMIALAVSAGTSQFAMASAQDDSKGFVEDSTFTINTRALYFSRDFRNNPSGPGS
KSRAEETGLGFNALYESGFTQGTIGVGVDVIGLMGLKLDSGKGRAGTGLFPTGSDGRSQD
DYSKGGGAVKFRISNTVLKVGDQYTTAPVFASDDSRLLPELPQGISITSNEIKGLKLEGG
HFTSSVAQAQTYHDSLGLTKTDFVGGVYAFTPEFTGSLYYAKTEDYFRKYYSNLNWTHAL
SDDQSFALDFNIYDTKSEGAGLQRAEKDGVTKLDNRAFSLQGAYTIGAHTFTLAAQKVTG
DGDYGYGVDGGGTVFLANSIARSDFNAEGEKSYQARYDINMATFGIPGLSFMTRYVTGSG
ANTGTTSNGKEWERDIEAKYVIQSGPAKDLSLRLRQATYRSGDGVYYGSPSIDELRLIAN
YPLNIL
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtgatgaagtggagcatgatcgccctggctgtttcagcaggcacctcgcagttc
gcaatggcgtccgcccaggacgattccaagggctttgttgaagacagtacgttcactatc
aatactcgcgccctgtacttcagccgcgacttccgtaacaacccttcgggcccgggttcg
aagagccgtgcagaagaaaccggccttggcttcaatgccctgtacgagtcgggcttcacc
caaggcaccattggtgtcggtgttgacgtgatcggcctgatgggcctcaagctcgacagc
ggcaagggtcgcgctggcaccggcctattccctacaggctccgacggtcgttcgcaggac
gattactccaagggcggcggcgcggttaagttccgcatctccaacaccgtgttgaaagtc
ggtgaccagtacactaccgcgccagtgttcgcctccgacgacagccgtctgttgccggaa
ctgccacagggtatctcgatcaccagcaacgagatcaagggcctcaagcttgagggcggc
cactttacttccagcgtcgcgcaggcacagacctaccatgacagcctgggcctgacgaaa
accgactttgtcggcggcgtctacgcgttcactccggaattcaccggtagcctgtactac
gcgaaaaccgaagattacttccgcaagtactacagcaacctgaactggacccacgcgctg
agcgatgatcagtccttcgcgctggacttcaacatctacgacaccaaaagcgagggcgca
ggcctgcaacgcgcagagaaggatggcgtgaccaagctcgacaaccgcgcgttcagcttg
cagggcgcgtacaccatcggcgctcacaccttcaccctggcagcccagaaggttaccggt
gacggcgactacggttacggcgtagacggcggcggcacggtgttcctcgccaactccatc
gcccgttccgacttcaacgccgaaggcgagaagtcctatcaggcgcgttacgacatcaac
atggcgaccttcggcattcctggcctgagcttcatgactcgctacgtcaccggtagcggc
gccaacactggcacaaccagcaacggcaaagagtgggaacgcgacatcgaagccaagtac
gtgattcagagcggcccggctaaagacctcagcctgcgtctgcgtcaagcgacttaccgc
tccggtgatggcgtttactacggttcgccttctatcgacgaactgcgcctgatcgcaaac
tacccgctgaacatcttgtaa
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