Pseudomonas synxantha LBUM223: VO64_1860
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Entry
VO64_1860 CDS
T03769
Name
(GenBank) Heat shock protein 60 family chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pfb
Pseudomonas synxantha LBUM223
Pathway
pfb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VO64_1860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfb03019
]
VO64_1860
03110 Chaperones and folding catalysts [BR:
pfb03110
]
VO64_1860
03029 Mitochondrial biogenesis [BR:
pfb03029
]
VO64_1860
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pfb04147
]
VO64_1860
Enzymes [BR:
pfb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
VO64_1860
Messenger RNA biogenesis [BR:
pfb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
VO64_1860
Chaperones and folding catalysts [BR:
pfb03110
]
Heat shock proteins
HSP60 / Chaperonin
VO64_1860
Mitochondrial biogenesis [BR:
pfb03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
VO64_1860
Exosome [BR:
pfb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
VO64_1860
Exosomal proteins of other body fluids (saliva and urine)
VO64_1860
Exosomal proteins of breast cancer cells
VO64_1860
Exosomal proteins of colorectal cancer cells
VO64_1860
Exosomal proteins of bladder cancer cells
VO64_1860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AKA82406
UniProt:
A0AAU8TPA4
LinkDB
All DBs
Position
complement(2075538..2077184)
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKEVKFGDSARKKMLTGVNVLADAVKATLGPKGRNVIIEKSFGAPTITKDGVSVAKEI
ELEDRFENMGAQLVKDVASRANDDAGDGTTTATVLAQAIVNEGYKAVAAGMNPMDLKRGI
DKATIAIVAELKNLSKPCADTKAIAQVGTISANSDSSIGDIIAQAMEKVGKEGVITVEEG
SGLENELSVVEGMQFDRGYLSPYFVNKPETMVAELDNPLILLVDKKISNIREMLPVLEAV
AKAGRPLLIVSEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGTV
ISEEIGLSLESATLENLGSAKRVTISKENTIIVDGAGVEGDIESRIAQIRAQVAETSSDY
DREKLQERLAKLSGGVAVIKVGAGSEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALI
RALEALTNLTGDNADQNVGIAVLRRAVEAPLRQIAANSGDEPSVVVNEVKNGKGNYGYNA
ATGIYGDMIEMGILDPTKVTRSALQAAASIGGLILTTEAAIAEKPKAEGAAGGGMSDMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagaagttaaattcggcgattccgcccgcaagaaaatgctcaccggtgtc
aacgtcctggctgacgcagtaaaagcgaccctcggcccgaaaggtcgtaacgtgatcatc
gagaagagcttcggcgctccgaccatcaccaaggacggcgtttccgtagccaaagagatc
gaactggaagaccgtttcgaaaacatgggtgcgcagctggtcaaagacgttgcctcccgt
gccaacgatgacgcaggcgacggcaccaccaccgctaccgtcctggcccaggcgatcgtc
aacgaaggctacaaggccgtcgctgccggcatgaacccgatggacctcaagcgcggcatc
gacaaggcgaccatcgccatcgtggctgagctgaagaacctgtccaagccatgcgccgac
accaaggccatcgctcaggtaggtaccatctctgccaactccgacagctccatcggcgac
atcattgcccaagcgatggaaaaagtcggtaaagaaggcgtgatcaccgttgaagaaggc
tcgggcctggaaaacgaactgtcggttgtagaaggcatgcagttcgaccgcggctacctg
tccccgtacttcgtcaacaagcctgagaccatggttgccgaactggacaacccactgatc
ctgctggttgacaagaagatctccaacatccgcgaaatgctgccagtgctggaagccgtt
gccaaagctggccgcccactgctgatcgtttccgaagacgtcgaaggcgaagccctggcg
accctggtcgtgaacaacatgcgtggcatcgttaaagtcgcggccgtcaaggctccaggc
ttcggtgatcgtcgcaaggccatgctgcaggacatcgctgtattgaccggcggtaccgtt
atctccgaagagattggcctgagcctggaaagcgccaccctggaaaacctgggtagcgcc
aagcgcgtaaccatctccaaggaaaacaccatcatcgttgacggtgctggcgttgaaggc
gacatcgagtcccgtatcgcccagatccgtgcacaggttgctgaaacctcctcggactac
gaccgtgaaaaactgcaagagcgcctggccaagctgtccggcggcgttgcagtgatcaag
gttggcgctggctccgaagtcgaaatgaaagagaagaaagcccgcgttgaagacgccctg
cacgcaacccgtgcagccgttgaagaaggcgtggtacctggcggtggcgttgcgctgatc
cgtgccctggaagccctgactaacctgaccggcgacaacgctgaccagaacgtcggtatc
gcggtactgcgtcgtgccgttgaagcaccgctgcgccagatcgctgccaactccggtgac
gagccaagcgttgtggtcaacgaagtcaagaacggcaagggtaactacggttacaacgct
gcgactggtatctacggcgacatgatcgaaatgggcatcctggaccctaccaaggtgacc
cgttccgcgctgcaagcggcagcctccatcggtggcctgatcctgaccaccgaagctgct
atcgctgaaaagccgaaggctgaaggcgcagctggcggcggtatgtcagatatgggcggc
atgggtggcatgggcggtatgatgtaa
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