Pseudomonas synxantha LBUM223: VO64_1915
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Entry
VO64_1915 CDS
T03769
Name
(GenBank) Trehalose operon transcriptional repressor
KO
K03486
GntR family transcriptional regulator, trehalose operon transcriptional repressor
Organism
pfb
Pseudomonas synxantha LBUM223
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfb03000
]
VO64_1915
Transcription factors [BR:
pfb03000
]
Prokaryotic type
Helix-turn-helix
GntR family
VO64_1915
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_DeoR
HTH_11
HTH_41
Rrf2
HTH_IclR
HTH_Crp_2
TrmB
HTH_28
FmdA_AmdA
HTH_36
DIP2311-like_C
Motif
Other DBs
NCBI-ProteinID:
AKA82461
UniProt:
A0AAQ1JLK7
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All DBs
Position
2142915..2143619
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AA seq
234 aa
AA seq
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MSKYNQIYTDLLASITTERLQRGTRLPSETELMDAYQASRGTVRRAIEQLQERGFAQKIH
GKGTFVLSPNPIEFQLGGIVSFHETHADLGNDVRTEVVEFTQLPLEGPLLQHFEADPGTL
ITRIKRVRRIGGKRVILDINHFIAELIPGLDREIAEQSIYAFIEQTLQLQISYAQRTIEA
LPRSKDDQAHLDLDGQSHVIVVSNQTFLQDGRQFEYTESRHTLDKFYFSDIARR
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaatacaaccagatctatacggatctgcttgccagcatcaccaccgaacgcctg
caacgcggtacgcgcctgccctctgaaaccgagctgatggacgcctaccaagccagccgt
ggcaccgtgcgacgcgccattgagcagttgcaggagcgtggctttgcccaaaagatccat
ggcaagggcacctttgtgttgtcgcccaacccgatcgagttccagctgggcggtatcgtc
agcttccatgagacccacgccgacctgggcaatgacgtacgcaccgaggtggttgaattc
acccagctcccgctcgaagggccactgctgcaacacttcgaggccgacccaggcacgctg
atcacccgtatcaagcgggtacgacgcatcggcggcaaacgggtgatcctggacatcaac
cacttcatcgccgagctgattcccggcctggatcgcgagatcgccgaacagtcgatctac
gcgtttatagagcagacgttgcagctgcagatcagctatgcgcagcgcaccatcgaggcc
ttgccgcgcagcaaggacgaccaggcgcacctggaccttgacgggcaaagccatgtgatc
gtggtgagtaaccagacgttcttgcaggacgggcggcagttcgagtacaccgaatcgcgc
cataccctggacaagttctacttttcggatatcgcacggcgctga
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