Pseudomonas synxantha LBUM223: VO64_2020
Help
Entry
VO64_2020 CDS
T03769
Name
(GenBank) Transcriptional regulator, RpiR family
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
pfb
Pseudomonas synxantha LBUM223
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfb03000
]
VO64_2020
Transcription factors [BR:
pfb03000
]
Prokaryotic type
Helix-turn-helix
Other families
VO64_2020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
DUF5591
Motif
Other DBs
NCBI-ProteinID:
AKA82566
UniProt:
A0AAU8TLS7
LinkDB
All DBs
Position
complement(2252578..2253438)
Genome browser
AA seq
286 aa
AA seq
DB search
MDILYQIRARQDSFSAGEGRIAKLMLEDVGFAASASLEALSQRAEVSTATLSRFARSVGC
RDLRDLRLQLAQASGVGSRFLDPAGLPEQSAFHRQILGDIEATLRQHLSGFNQPSFVDAV
NLLGKARMIHAFGMGGPSSLCSDELQVRLVRLGYSIAASHDPVMMRVTAATLGPEHALIV
CSLTGLTPELLEVVKLARSYDARIVAITLADSPLAQLADVLLPLQPAETSFIYKPTAARY
GMLLAIDLLATELALALPDENQERLRRIKLALDDYRGGPDSLPLGD
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggacatcctttaccagatccgcgcccgccaggactctttcagcgccggcgaagggcgt
atcgccaagctgatgcttgaggatgtgggctttgccgcctcggctagcctggaagcattg
tcccagcgggccgaggtcagtaccgccaccttgtcacgctttgcccgtagcgtcggctgc
cgcgacttgcgcgatttgcgcctgcaactggcccaggccagtggtgtgggcagccgcttt
ttggaccctgcggggttgccggaacaatcggcgtttcatcggcagatcctcggcgatatc
gaggcgacgctgcgtcagcacctgtcggggttcaatcaacccagtttcgttgatgcggtc
aatctattgggcaaggcgcggatgatccatgcattcggcatgggcggcccgtcgagcctg
tgcagtgatgaattgcaggtacgcctggtgcggctgggctactcgattgccgccagccat
gacccggtgatgatgcgggtcacggcggccaccctgggaccggagcacgccttgatcgtc
tgctccctcactggactgacccccgagttattggaggtggtaaagctggcacgcagctac
gacgcccgcatcgtcgccatcacgctcgccgattcgcctctggcgcagttggcggatgtg
ttgctaccgctgcaaccggcggaaaccagttttatctacaaacccaccgcagcccgctac
ggcatgctgctggccatcgacctgctcgccaccgagctggcgctggccctgccggatgaa
aaccaggagcgcctgcgccggatcaaactggccctggacgattaccgcggcggccctgac
agcctgccgcttggagactga
DBGET
integrated database retrieval system
