Pseudomonas synxantha LBUM223: VO64_2053
Help
Entry
VO64_2053 CDS
T03769
Name
(GenBank) Exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pfb
Pseudomonas synxantha LBUM223
Pathway
pfb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VO64_2053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfb03400
]
VO64_2053
Enzymes [BR:
pfb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
VO64_2053
DNA repair and recombination proteins [BR:
pfb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VO64_2053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
AAA_11
SH3_13
Helicase_RecD
AAA_22
Viral_helicase1
UvrD-helicase
AAA_16
SLFN-g3_helicase
AAA_17
AAA_28
T2SSE
AAA_5
NTPase_1
NACHT
AAA_25
TraI_hel_assoc_N
PhoH
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AKA82599
UniProt:
A0AAU8TQ09
LinkDB
All DBs
Position
complement(2286143..2288212)
Genome browser
AA seq
689 aa
AA seq
DB search
MNLSPLPLDELTPLSRAADLLQLLERWVDRGWLRALDKAFVGFLHELDPQADPLVLLATA
LTSHQLGHGHVCLDLFETLKAPDFALSLPPEGDPHTGAMLLPSQLLHGLDGAHWCHALAS
SQLVALAVDGSAAAQSRPLVLSGKRLYLRRYWAYERRIDSALRQRLASVEIVAADLPQRL
NRLFDQPAPDGVIDWQKLACALATRGAFSIVTGGPGTGKTTTVVRLLALLQAPAVESGNP
LRIRLAAPTGKAAARLTESISQQVLSLTVADNVREKIPTQVTTVHRLLGSRPGTRHFRHH
LGNPLPLDVLVVDEASMIDLEMMANLLDALPAHARLILLGDKDQLASVEAGAVLGDLCRD
AEAGWYSPHTRQWLQAVSGEDLSTSGLQEDLDGSHPLAQQVVMLRYSRRFGEGSGIGQLA
RWVNQQNAEEARQLLAARRHDDLFCVSLKGEHDHALERLVLDGQGDGAQGYRYYLNLLQS
ARPSLDTRRDDPAWTHWAQQLLQAFDAFQLLCAVRKGPWGVEGLNLRITAALRKVRLIES
DEQWYEGRPVLMTRNDYGLGLMNGDIGIALKLPESDGGPQVLRVAFPRNDGQGGVRFVLP
SRLNDVETVYAMTVHKSQGSEFTHTALILPDALNPVLTKELIYTGITRAKRWFSLIEPRA
GVFEEAVRRKVKRLSGLMLELDAVPEETD
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgtcgccgttaccgctggacgagctgacacccctgagccgcgccgccgacctg
ctgcaactgttagagcgttgggtcgaccgtggctggttgcgcgccttggacaaagccttc
gtcggcttcctgcatgagcttgatccccaggccgatcccctggtgctgttggcgaccgcc
ttgaccagccatcagttgggccatggtcacgtctgcctggacctgttcgaaaccctcaag
gcaccggacttcgccctgtcactgccgcccgagggcgacccgcacaccggcgccatgctg
ctgccgtcacagctgctgcatggcctggacggtgcccattggtgtcatgccctggcgtcc
agccaactggtcgcgctggcggtcgatggcagcgcagccgcccagagccgaccgttggtg
ttgtccggcaagcgcctgtacctacggcgctactgggcctacgaacggcgtatcgacagt
gccttgcgccagcgtcttgcgagtgtggagatcgttgccgccgatttgccgcagcgcctc
aatcgcctgttcgatcaaccggcgccggatggcgtgatcgactggcaaaaactcgcctgt
gccctggcgacccgcggcgcattcagtatcgtcaccggcggccccggcaccggcaagacc
accacggtggtgcgcctgctcgcgctgttgcaagcgcccgccgtggagtccggcaacccg
ttgcgtatccgtctggccgcgcccaccggtaaagccgccgcgcgcctgaccgaatccatc
agccagcaagtgctatcgctgacagtggccgacaacgtgcgggaaaaaatccccactcag
gtcaccactgtccaccgtctgctgggcagccgcccgggaacccgacatttccgtcatcac
ctgggtaacccgttacctctggatgtgctggtggtggatgaggcctcgatgatcgacctg
gaaatgatggccaacctgctcgacgccttgccggcccatgcacgcctgatactgctggga
gacaaggaccaactggcatcggtggaagcgggagccgtactcggcgacttgtgccgcgat
gccgaagccggctggtacagcccgcacacgcgccaatggttgcaagcggtcagcggcgaa
gacctcagtaccagtggcctgcaagaagacctcgatggcagtcatcccctggcccagcaa
gtagtgatgctgcgctattcgcgccgcttcggtgagggcagcggcatcggccaactggcg
cgttgggtcaaccagcaaaacgccgaagaggcccgccagctgttggccgcacgccgccac
gacgacctcttctgcgtcagcctcaagggtgaacatgaccacgcacttgagcgcctggtg
ctggacgggcagggcgacggcgcccaaggttatcgctactacctgaacctgctgcaatct
gcacgcccatcgctggatacgcggcgggacgaccctgcctggacccattgggcgcaacag
ctgctgcaagccttcgacgcgttccagctgctttgcgccgtacgcaagggcccttggggc
gtcgaagggctgaacctgcgcatcaccgcggcgctgcgcaaagtgcgcctgatcgaaagc
gatgagcagtggtacgaaggccgcccggtgctgatgacccgtaacgattacggcctgggc
ctgatgaacggcgacatcggcatcgcgctgaaattgcccgaaagcgacggtggcccccag
gtgctgcgcgtggccttcccgcgtaacgatggccagggcggcgtgcgctttgtgttgccc
agccggctcaatgacgtggaaaccgtgtacgcaatgaccgtgcacaaatcccaaggctct
gagttcacccataccgcactgatcttgccggatgccctgaacccggtactgaccaaagag
ttgatttataccggtatcacccgcgccaagcgctggttcagcctgattgagccccgggct
ggcgtgtttgaggaggccgtgcgccgcaaggtcaagcgcttgagcgggctgatgctggaa
ttggacgccgtgcctgaagaaactgactga
DBGET
integrated database retrieval system
