Pseudomonas synxantha LBUM223: VO64_2064
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Entry
VO64_2064 CDS
T03769
Name
(GenBank) Multimodular transpeptidase-transglycosylase
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
pfb
Pseudomonas synxantha LBUM223
Pathway
pfb00550
Peptidoglycan biosynthesis
pfb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VO64_2064
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pfb01003
]
VO64_2064
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pfb01011
]
VO64_2064
Enzymes [BR:
pfb01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
VO64_2064
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
VO64_2064
Glycosyltransferases [BR:
pfb01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
VO64_2064
Peptidoglycan biosynthesis and degradation proteins [BR:
pfb01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
VO64_2064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
UvrB_inter
Motif
Other DBs
NCBI-ProteinID:
AKA82610
LinkDB
All DBs
Position
complement(2308686..2311010)
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AA seq
774 aa
AA seq
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MTRSRSPRSRKKPPSRSLRPWLGWALKLGLVGLVVIAGFAVYLDAVVQEKFSGKRWTIPA
KVYARPLELFSGQKLSKEDFLTELDALGYRREPVSNGPGAAAVSGNTVDLNTRGFQFYEG
LEKAQPVRVRFSGDYVAELSSLNGSKLPVVRLEPLMIGGIYPKNLEDRILIKLDQVPPYL
LETLVAVEDRDFYSHWGVSPKSIARAIWVNTSGGKMTQGGSTLTQQLVKNFYLTNERSLT
RKLTEAMMAMLLELHYSKQEILEAYLNEVFVGQDGQRAVHGFGLASQFFFGQPLSELKLH
QVALLVGMVKGPSYYNPRRNPERALERRNLVLDVLEQQGVATAEQVAAAKKMPLGVTTRG
KLADSSFPGFIDLVKRQLREDYRDEDLTEEGLRIFTSFDPILQMKAEASVNDTFKRLTGR
KGSDEVEAAMVVTNPETGEVQAMIGSRQASFAGFNRALDAVRPIGSLVKPAVYLSALEKP
SKYTLTSWLSDDPLSVKGADGQVWTPKNFDRRSHGTVFLYQGLAHSYNISTSRLGLEVGV
PNVLKTLARLGIEREFPAFPSMLLGAAAMTPMEVATMYQTLANGGFNTPMRGIRSVLTAD
GEPLKRYPFQIQQRFDAGSIYLIQNAMQRVMREGTGRSVYNVLPSNLTLAGKTGTSNDSR
DSWFAGFGQDVLAVVWLGRDDNGKTPFTGATGALQVWTSFMRKADPLPLNMPQPDNIVQA
WIDPHTGQGSDANCPGAVQMPYIRGSEPPPGAACGGSAPADAESVMDWVKGWMN
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgactcgaagccgatctccccgttcccgtaaaaaacctccgtcccgcagcctgcgcccc
tggctgggctgggcgctcaagcttggcctggttggccttgtggtgatcgccggctttgcg
gtgtacctcgatgccgtggttcaggaaaagttctccggcaagcgctggaccattccggcc
aaggtgtacgcacgcccgctggagttgttctctggccagaagctgagcaaggaagacttc
ctgaccgagctcgacgcactgggctaccgtcgcgagcccgtgagcaatggcccgggcgcg
gcggccgtcagcggtaataccgtcgacctgaacacccgtggcttccagttctacgaaggc
ctggaaaaagctcagcctgtgcgtgtgcgtttttccggcgactatgtggctgagctgtcg
tcgctcaatggctccaagctgccggtggtgcgcctggaacccttgatgatcggcggtatt
tacccgaaaaatcttgaagatcgcatcctgatcaaactcgatcaggttccgccgtacctg
ctggaaaccctggtggctgtggaagaccgcgacttctacagccattggggcgtctcgccg
aagtcgattgcccgcgccatttgggtcaacacctccggcggcaagatgacccagggcggc
agtacgctcacgcagcaactggtcaagaacttctacctgaccaacgaacgcagcctgacc
cgtaaactcactgaagccatgatggcaatgttgctggagctgcattacagcaagcaggaa
atcctcgaggcctacctcaacgaggtattcgtcggtcaggatggccagcgcgcggtgcac
ggtttcggcttggccagccaattcttctttgggcagccattgtctgagttgaagttgcat
caagtcgcgttgctggtggggatggtcaaggggccgtcctattacaacccgcgtcgcaac
ccggagcgtgcgcttgagcgccgtaacctggtactcgatgtgctggagcagcaaggtgtt
gccacggccgagcaggtggccgcggcgaagaaaatgccactgggtgtgaccacccgtggc
aagttggcagacagctcattccccggctttatcgacctggtcaagcgtcagttgcgtgaa
gactaccgtgacgaagacttgaccgaagagggtctgcggatcttcaccagcttcgatccg
atcctgcaaatgaaggccgaggcgtcggtcaacgacaccttcaagcgactgaccggccgc
aaaggctcggatgaagtcgaggccgccatggtcgtgaccaacccggagaccggtgaagtc
caggccatgatcggtagccgccaggccagcttcgccggcttcaaccgcgcgctggatgct
gtgcgtccgataggctcgctggtcaagccggctgtctatttgagcgcattggaaaaaccc
agcaagtacacgctgaccagttggctgtcggatgacccgctatcggtcaaaggcgccgac
ggccaggtctggacgcccaagaacttcgatcgacgctcccacggtacggtgttcctgtat
caggggttggcacattcctacaacatctcgacctcacgcctggggcttgaggtcggtgtg
ccgaatgtgctgaagacattggcgcgactggggatcgaacgtgaattcccggcgttcccg
tccatgctactgggcgctgcggccatgactcccatggaagtggccaccatgtaccagacc
ctggccaacggcggcttcaatacgccgatgcgcggtattcgcagtgtgctgaccgccgat
ggcgagccgctcaagcgttatccgttccagatccagcagcgtttcgacgcgggctctatc
tacctgatccagaacgccatgcagcgcgtgatgcgtgagggtactgggcgttcggtctat
aacgtgctgccgtcgaacctgaccctggccggcaagaccggtaccagtaacgattcgcgt
gacagctggttcgcgggctttggccaggatgtattggccgtggtgtggctggggcgtgac
gataacggcaagacgccgtttaccggggccaccggtgcgttgcaggtgtggaccagtttc
atgcgcaaggccgacccgttgccgctcaacatgccgcagccggacaatatcgtgcaggcc
tggatcgacccgcacaccggccaaggctctgatgccaactgtccgggcgcggtacagatg
ccgtatattcgcggcagcgaaccaccacccggcgccgcatgcggtggcagtgcccctgct
gacgcggaatcggtcatggattgggtcaagggctggatgaattaa
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