Pseudomonas synxantha LBUM223: VO64_2170
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Entry
VO64_2170 CDS
T03769
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pfb
Pseudomonas synxantha LBUM223
Pathway
pfb00260
Glycine, serine and threonine metabolism
pfb00460
Cyanoamino acid metabolism
pfb00630
Glyoxylate and dicarboxylate metabolism
pfb00670
One carbon pool by folate
pfb00680
Methane metabolism
pfb01100
Metabolic pathways
pfb01110
Biosynthesis of secondary metabolites
pfb01120
Microbial metabolism in diverse environments
pfb01200
Carbon metabolism
pfb01230
Biosynthesis of amino acids
pfb01240
Biosynthesis of cofactors
pfb04981
Folate transport and metabolism
Module
pfb_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
VO64_2170
09102 Energy metabolism
00680 Methane metabolism
VO64_2170
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VO64_2170
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
VO64_2170
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
VO64_2170
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
VO64_2170
Enzymes [BR:
pfb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
VO64_2170
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AKA82716
UniProt:
A0AAU8TM62
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All DBs
Position
2439056..2440309
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AA seq
417 aa
AA seq
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MFSRDLTIAKYDADLFAAMEQEAVRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKQLFGADYANVQPHAGSQANSAVYLALLQGGDTILGMS
LAHGGHLTHGASVSSSGKLYNAVQYGINADGLIDYDEVERLAVEHKPKMIVAGFSAYSQV
LDFPRFRAIADKVGAYLFVDMAHVAGLVAAGVYPNPVPYADVVTTTTHKTLRGPRGGLIL
ARANAEIEKKLNSAVFPGAQGGPLEHVIAAKAICFKEALQPEFKTYQEQVVKNAQAMAKV
FIERGFDVVSGGTENHLFLLSLIKQDISGKDADAALGKAFITVNKNSVPNDPRSPFVTSG
LRFGTPAVTTRGFKEAECKELAGWICDILADLNNEAVIDAVREKVKAICKKLPVYGA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgtgatttgactattgccaagtacgacgccgatctcttcgccgccatggag
caagaagccgtgcgccaggaagagcacattgagctgatcgcttcggaaaactacaccagc
cctgcggtgatggaggctcaaggttcggttctgaccaacaagtacgccgaaggctaccca
ggcaagcgctactacggtggttgcgagtacgtcgacgtggttgagcagctggctatcgac
cgtgccaagcaactgttcggcgccgattacgccaacgtccagccgcatgccggctcccaa
gccaacagcgcggtgtacctggccctgctgcaaggcggcgacaccatcctgggcatgagc
ctggcccacggcggccacctgacccacggtgccagcgtctcgtcctccggcaagctgtac
aacgccgtccagtacgggatcaatgccgacggcctgatcgactacgacgaagtcgagcgc
ctggcggtcgagcacaagccgaaaatgatcgtggccggtttctctgcctactcgcaggtc
ctggatttcccacgtttccgcgccatcgccgacaaagtcggcgcctacctgttcgtcgac
atggctcacgtagccggtctggtcgccgctggcgtctacccgaacccggtgccttacgct
gacgtggtgaccaccaccacccacaagaccctgcgcggcccacgtggcggcctgatcctg
gcgcgcgccaacgccgagatcgagaagaagctcaactccgcagtgttcccgggcgcccag
ggtggcccactggagcacgtgatcgccgccaaggccatctgcttcaaggaagccctgcag
cctgaattcaagacctatcaggaacaggtagtaaagaacgcccaagccatggccaaggtc
tttatcgagcgcggttttgacgtggtgtccggcggtactgaaaaccacctgttcctgctg
tcgctgatcaagcaggacatttccggtaaagatgctgacgctgccctgggcaaagccttc
atcaccgtaaacaagaactccgtaccgaacgacccacgctcgccgttcgtcacctccggc
ctgcgcttcggcaccccggcagtgaccactcgcggtttcaaggaagccgagtgcaaggaa
ctggccggctggatctgcgacatcctggcagacctgaacaacgaagccgtgatcgacgcg
gtacgtgagaaggtcaaggccatctgcaagaagctgccggtatacggcgcgtaa
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