Pseudomonas synxantha LBUM223: VO64_2175
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Entry
VO64_2175 CDS
T03769
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pfb
Pseudomonas synxantha LBUM223
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfb03400
]
VO64_2175
DNA repair and recombination proteins [BR:
pfb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
VO64_2175
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
DUF7125
AAA_16
DnaB_C
GvpD_P-loop
AAA_22
SLFN-g3_helicase
RecA_N
AAA
nSTAND_NTPase5
Rad51
nSTAND3
NTPase_1
AAA_24
AAA_14
MCM
zf-C2H2_6
AAA_29
DUF7129
Motif
Other DBs
NCBI-ProteinID:
AKA82721
UniProt:
A0A0E3GYK3
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All DBs
Position
complement(2444442..2445809)
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AA seq
455 aa
AA seq
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MAKAKRMYGCTECGATFPKWAGQCSECGAWNTLTETMIESGGAAAPTGRAGWTGQQAQIK
TLAEVSVEEIPRFSTASGELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCSIASRMP
ALYVTGEESQQQVAMRARRLGLPQDQLRVMTETCIESIIATARIEKPKVMVIDSIQTIFT
EQLQSAPGGVSQVRESAALLVRYAKQSGTAIFLVGHVTKEGALAGPRVLEHMVDTVLYFE
GESDGRLRLLRAVKNRFGAVNELGVFAMTDRGLKEVSNPSAIFLTRAQEEVPGSVVMATW
EGTRPMLVEVQALVDDSHLANPRRVTLGLDQNRLAMLLAVLHRHGGIPTHDQDVFLNVVG
GVKVLETASDLALMAAVMSSLRNRPLPHDLLVFGEVGLSGEVRPVPSGQERLKEAAKHGF
KRAIVPKGNAPKEMPQGLQVIGVTRLEQALDALFE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggccaagcgcatgtacggctgcacagagtgcggcgcgacctttcccaaatgg
gcaggccagtgctccgagtgtggtgcgtggaacaccctgactgaaaccatgatcgagagc
ggcggggcggcagcgcctactggccgcgccggctggaccgggcaacaggcccagatcaag
accctggccgaggtcagtgtcgaagagatcccgcgtttctccaccgcctccggtgagctg
gatcgcgtactcggcggtggcctggtggacggttcggtggtgctgatcggcggtgacccg
ggcatcggcaagtcgaccatcctcttgcagaccctgtgcagcatcgccagccgcatgccg
gcgctgtatgtcacgggcgaagagtcccagcaacaagtggccatgcgcgcccggcgcctg
ggcttgccccaggaccagctgcgggtcatgaccgaaacctgcatcgaaagcatcattgcc
acggcgcggatcgaaaagcccaaggtcatggtgatcgactcgatccagacgatttttacc
gagcaattacaatcggcaccgggtggcgtgtcccaggtacgggaaagtgcggcgctgttg
gtgcgttatgccaagcagagtggcacggcgatcttcctggtggggcatgtgaccaaggaa
ggcgcgttggccgggccaagggtgttagagcacatggtcgacaccgtgctgtatttcgaa
ggtgaatccgatggtcgcctgcgcttgctgcgggcggtgaagaaccgttttggcgcggtg
aacgagctgggtgtgttcgccatgaccgaccgagggctgaaagaagtctccaatccatcg
gcgatttttctgacccgcgcccaagaggaagtcccgggcagtgtggtgatggccacgtgg
gaaggcacccggccgatgctggtggaagtccaggcgctggtggatgacagccatctggcc
aacccgcgaagggtcacgctcggcctggaccagaaccgcctggcgatgttgctggcggta
ttgcaccgccacggcggtatcccgacccacgaccaggatgtgttcctcaacgtggtcggc
ggggtcaaggtgttggagaccgcctccgacctggcgctgatggcggcggtgatgtccagc
ctgcgcaatcggccgttgcctcatgacctgctggtgttcggtgaagtgggtttgtcgggt
gaagtgcgcccggtgcccagcgggcaggagcgattgaaggaggcagccaagcatggcttc
aagcgtgcgatcgtgcccaagggtaatgcgccgaaggaaatgccccaggggttgcaggtc
attggggtgacacgcctggagcaggcgttggatgcactgttcgagtag
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