Pseudomonas synxantha LBUM223: VO64_2260
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Entry
VO64_2260 CDS
T03769
Name
(GenBank) Ribosomal large subunit pseudouridine synthase E
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
pfb
Pseudomonas synxantha LBUM223
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfb03009
]
VO64_2260
Enzymes [BR:
pfb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
VO64_2260
Ribosome biogenesis [BR:
pfb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VO64_2260
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AKA82806
UniProt:
A0AAU8TME6
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All DBs
Position
complement(2543847..2544443)
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AA seq
198 aa
AA seq
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MKPPHAAARRVAKAPPSEPKLILFNKPFDVLTQFSDESGRATLKDFIDIPGIYPAGRLDR
DSEGLLLLTNDGQLQARIADPKHKLAKTYWVQVEGEPTQEQLQRLRDGVELNDGMTLPAE
ARLLDEPALWPRNPPVRFRKSVPTHWLELVIREGRNRQVRRMTAAVGLPTLRLVRVRIGD
WSIDGLDQGQWKAVPARL
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacctccacatgccgctgcccgtcgtgtcgccaaggcgccaccgtccgagccgaag
ctgatcctgttcaataaaccgttcgacgtgctgacccagttcagcgacgaaagtgggcgt
gcgaccctcaaggactttatcgacattcccggcatttacccggcggggcgcctggaccgt
gacagcgaaggcctgctgttgctgaccaatgacggtcagttgcaggcacgtattgccgac
cccaagcacaagctggcgaaaacctattgggtgcaggtggaaggcgagccgacgcaagaa
cagctgcaacgcctgcgcgatggcgtggaactcaatgacggcatgaccttgcctgccgag
gcgcggctactggatgaacccgcgttatggccgcgcaacccgccggtacgctttcgcaaa
agtgtgccgacccattggctggagctggtcattcgcgaagggcgtaaccgccaggtccgg
cgcatgaccgcggcggtgggcctgccgacgttaagactggtgcgcgtgcgcattggtgat
tggtctatcgatggcctggatcagggccaatggaaggcagtaccggcgcgtttatag
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integrated database retrieval system
