Pseudomonas synxantha LBUM223: VO64_2312
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Entry
VO64_2312 CDS
T03769
Name
(GenBank) Nitrogen regulation protein NR(I)
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pfb
Pseudomonas synxantha LBUM223
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfb03000
]
VO64_2312
Transcription factors [BR:
pfb03000
]
Prokaryotic type
Helix-turn-helix
Other families
VO64_2312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
PAS_4
AAA_2
PAS_9
PAS_8
HTH_20
AAA
PAS
HTH_17
HTH_7
HTH_30
Diguanyl_cycl_sensor
AAA_30
LZ_Tnp_IS481
dnstrm_HI1420
IclR_C
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AKA82858
UniProt:
A0AAU8TK20
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Position
complement(2600896..2602806)
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AA seq
636 aa
AA seq
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MHNDHFSRHAQQVLTVTRGQELSQGPGSDPSIARSWLRCVEDYHLDPAQTIAPTVLEHGR
LLESRERLRQVLHIAGSEMNSLHQQLSGAGHAVLLTDARGVILNCVTAPSERKIFERAGL
WLGADWSEACEGTNGIGTCLVERQSLTIHRDEHFRGRHTGLTCSASPVFDPHGELLAVLD
VSSAREAVSRQSQFHTMALVNLSAKMIESCYFLRHFEHHWLLRFHLQAESVGLFSEGLLA
FDGEGRICAVNQSALNLLGQLRGGLLGQPVEAFFDCSLDQLLGRASANASASWPLRTREG
RHLFAALRGQPRSVTAPVVKSLEAPRLPGICLGDPALQNDFRRAVRVFERDVPLLINGET
GSGKEAFAKAVHQASQRADKPFIALNCAAIPESLIESELFGYRAGSFTGALKEGMRGKLQ
QADGGTLFLDEIGDMPLALQTRLLRVLEDRLVVPIGGEAQAVNVRIISATHRNLLERMQD
GSFREDLYYRLNGLEIGLPPLRERSDKAQLLDFLLAQEAGRLAVVLDARARQALLGYAWP
GNVRQLRTVLRTLVALNESGNVSLEELPREVRQARPEPVSEAYQGAILDDAERRVLLDTL
EQQCWHMTQTASCLGLSRNTLYRKLRKHRISRGSVV
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgcataacgatcatttcagtcgccatgcccagcaagtcttgaccgtcacccgcggacag
gagctgtcccaggggccgggcagcgatccatccatcgctcgttcctggctgcgttgcgtg
gaggattatcacctcgaccctgcgcagaccatcgcccccacggtgcttgaacacggccgc
ctgctggaaagccgcgagcgcttgcgccaagtgctgcatatcgccggcagcgagatgaac
agcctgcatcaacaactgtccggcgccggtcatgcggtgctgctcaccgacgcgcgcggg
gtgatcctcaactgtgtcaccgcgccctctgagcgcaagatcttcgagcgcgccgggttg
tggctgggcgcggactggagtgaagcctgcgaaggcactaacggcattggcacctgcctg
gtggagcgccagtccttgaccattcaccgcgatgaacacttccgtggccgccataccggg
ctgacctgctcggcaagtccggtgttcgacccccacggtgagctgctggcggtactcgat
gtgtcctcggcacgcgaagcggtatcgcgccagagccaattccacaccatggcgctggtg
aacctgtcggcgaagatgatcgagagttgctactttctacgccattttgagcaccactgg
ctgctgcgctttcacctgcaggccgagtcggtgggcctgttcagtgaggggctgttggcg
ttcgatggtgaagggcgcatttgcgcggtcaaccagagcgcgttgaacctgctggggcag
ctgcgcggtggtttgttggggcaacccgtggaagcatttttcgactgctccctggaccaa
ttgctcggtcgagccagtgccaatgccagcgccagctggcccctgcgtacgcgagaaggg
cggcatttattcgccgcgttgcgcggccaaccgcgtagcgtgacagcgcccgtggtcaaa
tcacttgaggcaccacgactgcccggcatctgtctgggcgatccggccttgcaaaatgac
tttcgcagggccgtgcgagtgttcgagcgtgacgttccgctgttgatcaacggagaaacc
ggttccggcaaagaagcctttgccaaggctgtgcatcaggccagccaacgtgctgataag
ccttttatcgcacttaactgcgccgccattccggaaagcctgatcgaaagcgaactgttt
ggttatcgcgctggcagttttaccggggctctcaaggagggcatgcgcggcaagttgcaa
caggccgatggcggtacactctttcttgacgagattggcgacatgccactggctttgcag
actcgcctgttgcgagtgcttgaggatcgcctggtggtgcccatcggtggcgaggctcaa
gccgtgaacgtgcggattatcagcgctacacaccgtaacttgctggagcgcatgcaggac
ggcagttttcgcgaagacttgtactatcggttgaacggtctggagattgggttgccgccc
ctgcgcgaacgcagtgacaaggcgcaactgctcgactttttgctggcgcaggaagccggt
aggctagcggtggtactggacgcgcgagctcgccaagccctgctgggatacgcctggcct
ggaaatgtgcgccagttgcgcacagtgttgcgcacattggtggcactgaatgagagtggc
aacgtcagtcttgaggagcttcccagggaggttcgccaggctcggcctgaaccggtcagt
gaggcgtaccaaggggccattctggatgacgcagagcgacgtgtactgcttgatacgttg
gagcaacagtgttggcatatgacccaaacggctagctgcctgggtttaagtcgcaataca
ctttacaggaagttgcgtaaacaccggatctcgcgaggtagtgttgtttag
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