Pseudomonas synxantha LBUM223: VO64_2608 Help Entry VO64_2608         CDS       T03769                                  Name (GenBank) ATP-dependent RNA helicase RhlE   KO K11927   ATP-dependent RNA helicase RhlE [EC:5.6.2.7] Organism pfb  Pseudomonas synxantha LBUM223 Pathway pfb03018   RNA degradation Brite KEGG Orthology (KO) [BR:pfb00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     VO64_2608  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pfb03019]     VO64_2608 Enzymes [BR:pfb01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.7  DEAD-box RNA helicase      VO64_2608 Messenger RNA biogenesis [BR:pfb03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Helicases      VO64_2608 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD Helicase_C ResIII Cas3-like_C_2 P-loop_SecA Motif Other DBs NCBI-ProteinID:  AKA83154 UniProt:  A0AAU8TRN9 LinkDB All DBs Position 2921825..2923714 Genome browser AA seq 629 aa AA seqDB search MSFASLGLSEALVRAIEAAGYTEPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPIL ERLFPNGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKLYARDLKFVSACIFGGVGMN PQVQAMSRGVDVLVACPGRLLDLCGQGSVDLSHVEILVLDEADRMLDMGFVHDVKKVLAR LPAKRQNLLFSATFSQDITALAGKLLHNPERIEVTPPNTTVERIEQRVFRLAASHKRSLL AHLITHGAWEQVLVFTRTKHGANRLAEYLDKHGLTAVAIHGNKSQNARTKALADFKAGSV RILVATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRAGRSGEAISLVAPDEEKL LKSIERMTKQKIADGDLMGFDASAVEAEKPEARERPDVRNPRNPRGPKGDGPNGGGGGGG RRDKGKDKGKEKSATSSRGERPAREQKPREGTPAREQRQPSQPPRAAADRAPDEFLDDDV DNFGNRVDYVPQAKPAQGRGRRPGAPAQGAGAGAPRGGQPQGGRQNGPRNSSGGSTGTPP AKRSGPRNGAPRDGQARREDSRSNNRRPARDDQPRLSEPAVQNPRGGPAPKIIHKESKAD RFPTPEQLDQLPGRPRGEKPALLTRNREA NT seq 1890 nt NT seq  +upstreamnt  +downstreamnt atgtcctttgcttccctcggtctctccgaggctttagtccgcgccatcgaggcagcgggc tataccgagcctactccggtgcaacagcgggccattcccgccgtgttgcaaggtcgcgac ctgatggtcgcggctcagacaggtactggtaaaaccggcggtttcgccctcccgatcctg gagcggttgtttcccaacggtcacccggacaaatcccagcgtcatggcccgcgccaaccg cgcgtactggtcctgaccccaacccgcgaactcgccgcccaagtgcatgacagcttcaag ctgtatgcccgcgacttgaagttcgtcagcgcctgcatcttcggcggcgtcggcatgaac ccccaagttcaggccatgtcccgtggcgtcgacgtgctggtggcctgccccggtcgtttg ctcgacctttgcggccaaggcagcgtcgatttgtcccacgtggaaatcctcgtgctggac gaagccgaccgcatgctcgacatgggctttgtccatgacgtgaagaaggtcctcgcccgc ctgccagccaaacgtcaaaacctgctgttctcggcgacgttctcccaggacatcaccgcc ctggccggcaagctgctgcataacccggaacgcatcgaggtcacgccgccgaacaccacg gtcgagcgtatcgagcaacgcgtattccgcctggccgccagccacaagcgctcgctgttg gcacacctgatcacccacggcgcgtgggaacaggtgctggtcttcacccgcaccaagcac ggcgccaaccgcctggccgagtacctggacaaacacgggctcactgccgtagccatccac ggtaacaagagccagaacgcacgcaccaaggccctggcagatttcaaggccggctcagta cgtatcctggtcgccaccgatatcgccgcccgcggcctggatatcgaccagttgccacac gtggtcaacttcgagttgcccaacgtcgatgaagactatgtgcaccgtatcggccgtact ggccgcgccggtcgttcgggcgaggctatttccctggtcgcgccggacgaagaaaaactg cttaaaagcatcgagcgcatgaccaagcagaagatcgccgacggcgacctgatgggcttc gatgccagcgccgtggaggccgagaaacctgaagcccgcgagcgtccagatgtgcgtaac ccgcgcaacccacgcggtccgaagggcgatggcccgaacggcggcggtggtggcggtggt cgtcgcgacaaaggcaaggacaagggcaaggaaaagtccgccaccagcagccgaggtgaa cgcccggcccgtgagcaaaagccacgtgaaggcaccccggcccgcgaacagcgccagccg agccagccgccacgcgccgccgctgaccgtgccccggacgagttcctcgacgacgatgtg gataactttggtaaccgcgtcgactacgtgccccaggccaagccggcccagggccgtggc cgtcgtccaggtgccccggcacaaggcgccggtgcgggtgctccccgtggcggccagcct cagggcggtcgccagaacggcccgcgcaacagcagcggcggcagcaccggtactccgcct gccaagcgcagcggcccgcgtaatggtgcaccgcgtgacggccaggcgcgtcgcgaagat tcgcgcagcaacaaccgccgcccggcccgtgacgaccagccacgcctgtccgagccagcg gtgcaaaacccgcgtggtggcccggcgccgaagatcatccataaggagtcgaaagctgat cgcttcccgacacccgagcagttggaccaactgcccggccgtcctcgtggtgaaaaaccg gcactgctgactcgcaaccgcgaggcataa

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