Pseudomonas synxantha LBUM223: VO64_2680
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Entry
VO64_2680 CDS
T03769
Name
(GenBank) LSU m5C1962 methyltransferase RlmI
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
pfb
Pseudomonas synxantha LBUM223
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfb03009
]
VO64_2680
Enzymes [BR:
pfb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
VO64_2680
Ribosome biogenesis [BR:
pfb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VO64_2680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrans_SAM
PUA_3
Cons_hypoth95
Methyltransf_15
Methyltransf_31
MTS
Methyltransf_25
TRM5-TYW2_MTfase
UPF0020
PrmA
FtsJ
Methyltr_RsmB-F
Methyltransf_24
TRM
Spermine_synth
YfdX
Anamorsin_N
Motif
Other DBs
NCBI-ProteinID:
AKA83226
UniProt:
A0AAU8TNH1
LinkDB
All DBs
Position
2989703..2990899
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AA seq
398 aa
AA seq
DB search
MSLPSLRLKANADRRLRNGHLWVYSNEIDVAATPLHGFQAGDQAILEAAGGKTLGIVAMS
PNNLICARLLSRDIKLPLDKSLLVHRLNVALSLRDRLFDKPFYRLVYGDSDLLPGLVVDR
FGDILVVQIASATMETHKEDVIAALTQVLKPSGILFKNDSAARDAEGLNRYVETVFGLVP
EWVALEENGVKFEAPVIQGQKTGWFYDHRMNRARLAPYAKGKRVLDLYSYIGGWGVQAAA
FGASEVFCVDASAFALDGVERNAALNGVAEKMTCIEGDVFEALKELKASEERFDVIVADP
PAFIKRKKDMKNGEGAYRRLNEQAMRLLSKDGILVSASCSMHLPEDDLQNILLTSARHLD
RNIQMLERGGQGPDHPVHPAIVETRYIKSITCRLLPNS
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgccaagcctgcgtctcaaagccaacgctgatcgtcgtttgcgcaacggccac
ctgtgggtctacagcaacgaaatcgacgtggccgccacacctcttcacggcttccaggca
ggcgaccaggcgatcctggaagcggccggcggcaagaccctgggcatcgtggccatgagc
cccaacaacctgatctgcgcccgcctgctgtcgcgtgacatcaagttgccgctggacaag
tcactgctggtgcaccgcctcaacgtcgcgctgtccctgcgtgatcgcctgttcgacaag
ccgttctaccgtctggtctacggtgattccgacctgctgccgggcctggtggtcgaccgt
ttcggcgacatcctggtggtacagatcgcctcggcgaccatggaaacccataaagaagac
gtgatcgccgcgctgacccaagtgctcaagccgagcggcatcctgttcaagaacgattcc
gccgcacgtgacgccgagggcctcaaccgctacgtcgaaaccgttttcggcctggtgccg
gagtgggtggcgctggaagagaacggcgtgaaattcgaagccccggtgatccagggccaa
aagaccggctggttctacgaccaccgcatgaaccgcgcccgcctggccccgtacgccaaa
ggcaagcgcgtgctcgacctgtacagttacatcggcggctggggcgtgcaggccgccgcc
tttggcgccagtgaagtgttctgcgtcgatgcgtcggccttcgccctcgacggcgtcgag
cgcaacgccgcgctgaacggtgttgccgagaagatgacctgcatcgaaggcgacgtattc
gaagccctgaaagaactgaaagccagcgaagaacgcttcgacgtgatcgtcgccgacccg
ccagccttcatcaagcgcaagaaagacatgaaaaacggcgaaggcgcctaccgccgcctt
aacgagcaagccatgcgcctgctcagcaaggacggcatcctcgtcagcgcctcgtgttcc
atgcacctgccggaagatgatctgcagaacatcctgctgaccagcgcccgccacctggac
cgcaatatccagatgctcgaacgcggcggccagggtccggatcatccggtgcacccggcg
attgtcgaaacgcgctacatcaagagcattacgtgccggttgctacccaatagctaa
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