Pseudomonas synxantha LBUM223: VO64_2908
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Entry
VO64_2908 CDS
T03769
Name
(GenBank) Uncharacterized protein ImpJ/VasE
KO
K11893
type VI secretion system protein ImpJ
Organism
pfb
Pseudomonas synxantha LBUM223
Pathway
pfb02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
VO64_2908
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pfb02044
]
VO64_2908
Secretion system [BR:
pfb02044
]
Type VI secretion system
Imp/Vas secretion system core components
VO64_2908
BRITE hierarchy
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GFIT
Motif
Pfam:
T6SS_VasE
PADRE
Motif
Other DBs
NCBI-ProteinID:
AKA83454
UniProt:
A0AAQ1G2D8
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Position
complement(3233315..3234649)
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AA seq
444 aa
AA seq
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MSWNNRVVWSEGMFIGTQHFQQHDRYLENLIDARSRPLSAGAWGFSELLIDQGLLAQGKL
AIVSARGLLPDGTPFNIPQDDLAPSPLNIDDNLRDGLVYLALPLKRAGARDTVDEGEALE
AARYVSQVREVRDDNAPFENRAPVAVGSRALRLLTAQDGISDYAAIGLVRIKEKRADRAL
VLDDTYIPPVLDVAASKPLTAFRSELLGLLHQRGEALAGRVVASGAGGASEIADFMLLQL
VNRAQPLIQHFNQLSPLHPERFFSELVSLAGEFSTFSTSGRRPQEYPQYQHDDLALSFTP
VMAALREALSMLIDSKATPIPIVEKAYGIHVAMLADKTLLDNASFILVVRADVPGETLRA
RFGQQSKVGSVEHIRDMVNLQLPGIGLLPLPVAPRQLPYHAGSTYYELDRGSEHWQQLSN
SGGFAFHIAGQFPGLNLAFWAIRG
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtcctggaacaatcgcgtggtctggtcggaaggcatgttcatcggaacgcagcacttc
cagcagcatgaccgttacctggaaaacctgatcgacgcccgcagccgcccgttgtcggca
ggcgcctggggcttttccgaattgctgatcgaccagggtctgctggcccagggcaagctg
gcgattgtgtcggcccgtggcctgttgccggacggcacgccgttcaatatcccccaggat
gacctggcgccgagcccgttgaatatcgatgacaatctgcgcgacggcctggtgtaccta
gccctgccgctcaagcgtgcgggtgcccgcgacaccgtcgatgagggcgaagccctggaa
gccgcacgttatgtgagccaggtgcgcgaagtgcgcgacgacaacgcgcctttcgaaaac
cgcgcgccagtggccgtgggttcgcgagcgttacgcctgctgacggcgcaggacggtatc
agcgactacgccgccatcggcctggtacgcatcaaggaaaaacgcgccgaccgcgcgttg
gtgctggatgacacctatatcccgccggtgctggatgtggccgcaagcaaaccgttgacg
gcctttcgcagcgaactgctcggcctgttgcaccagcgtggcgaagctttggccggccgc
gttgtggcctccggcgctggcggcgcctcggagattgccgacttcatgctgttgcaactg
gtcaatcgcgcgcagccgctgatccagcatttcaaccagttgagcccgctgcacccggaa
cgcttcttcagtgaattggtgagcctggccggtgagttttccaccttttcaacctcgggt
cggcgcccccaggaatacccgcaataccagcatgatgacctggccttgagcttcacgccg
gtcatggccgccttgcgtgaggcgctgtcgatgctgatcgacagcaaggccacgccaatc
ccgattgtcgagaaagcctacggcatccacgtggccatgttggccgacaagaccttgctc
gacaacgccagtttcatcctcgtggtgcgtgccgatgtgcctggcgaaaccctgcgtgcg
cgcttcggccagcaaagcaaagtcggttcggtggagcacatccgcgacatggtcaacctg
caactgccgggcattggcctgctgccgttgccggtggcgccgcgccaattgccgtaccac
gccggtagcacctactacgagctggaccggggcagcgagcactggcagcagttgagcaat
tccggcggttttgccttccatatcgccgggcagttcccgggcttgaacctggccttctgg
gcgatccgaggataa
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