Pseudomonas synxantha LBUM223: VO64_2976
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Entry
VO64_2976 CDS
T03769
Name
(GenBank) Sensory box/GGDEF family protein
Organism
pfb
Pseudomonas synxantha LBUM223
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_3
PAS_9
PAS_4
PAS
PAS_8
DUF2070
PAS_PdeA
BLTP1_N
Motif
Other DBs
NCBI-ProteinID:
AKA83522
UniProt:
A0AAU8TML5
LinkDB
All DBs
Position
complement(3318850..3321723)
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AA seq
957 aa
AA seq
DB search
MTLSTDLFGPSAAPAQVIRKHYATQMAVERTRLLYQGSLLPTLLMLVNGLVCAWLLWNPQ
QYLLDSIWLLWLLALVAMRVIQVAAFDSAMPSRQAQPVWRRMFMLGSAVSGLTLSVAAIA
LVPADSFMHQAWVFGLIGAASLSASVAYAVSLWAFLSFVLPCLVPAIVYLFWNGTAQQQG
WGVLGLILLASLSLVAWQVNRLIQRGLLRRFQNQALIEHLQQSQQRSEQLNLELVREVEQ
RRQVEQDLRDAQVGLQDGMARRSQELDAASLALNKSEARLAMALQASELGLWDWNLQTDE
VHHTQLKELFGLEPEYVTAMLSHLKPRLHPDDLPLLKRALVEHLKGRSEDYQVEYRVRHG
DGHWVWIQDRGRAVERAPNGRVTRMLGTRRDISASKALEEQQRLASTVFEAASEGIVILD
PEYVLIAVNQAFSRVTGFDIDDMLGRNVVELPSSRDARRHFPVIRQALLSHGTWQGELVE
TRKNGELYPQWLQLNVVRDVRGNVSHIVGFFADLSARRESEERMRYLTHYDELTGLANRS
LFRERLREAHQRVRQGGRSLALLHINLDRFKLLNDSLGHEVADQLLQKMARRLINALPEA
DTIARLSGDEFAVLFDAYGNLSSLARVATRLLAKLRVPVTVEGHELVVSASMGVSLLPDN
AREISALVSQSNMAMQHAKHLGGNNFQFYTDSLQASTLERLQLENHLRKAIEERHLSVFY
QPKLCLATGKLNAAEALIRWEHPQWGMVPPGDFIGLAEETGLIVPLGEFVLRQACWQACE
WQRQGLAPIRVSVNLSVHQLRQGKLVSLVRQVLEETGLDPQYLELELTESQLLDSVEHII
ATFQQLRDLGVKLAIDDFGTGYSSLSYLKRIPVDYVKIDQTFIRGLGQGREDAAITRAII
AMAHGLALKVVAEGVEDQQQLEFLRGEQCDEVQGYLISQPMPAEGLADLLRKNADFS
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgacccttagcaccgacctgttcggcccctcggcggcgccggcgcaggtcatccgtaaa
cactatgcaacccaaatggcggtcgagcgcacacgcctgctatatcagggctcattgctg
ccgacgctgctgatgctggtcaatggcctggtctgcgcctggttgctttggaacccccag
caatacctgctcgacagcatttggttgctctggctactggccctggtggcgatgcgtgtg
attcaggtggcggcctttgattcggcgatgcccagccgtcaggcccagccggtgtggcgg
cgtatgttcatgctcggttcggcggtcagtggcttgacgctttctgtcgcggccatcgcc
ttggtacctgccgacagcttcatgcatcaggcctgggtgtttggcctgatcggcgccgct
tcattgtcggccagcgtggcctatgccgtgagcctgtgggccttcctgtcgtttgtcttg
ccgtgcctggtgccggccatcgtctatctgttctggaatggcacggcccagcagcagggc
tggggtgtgctcggcctgatcctgctggcgtccctgagcctggtggcctggcaggtcaac
cggctgattcagcgcgggctgttgcgacgatttcagaaccaggccttgatcgagcatttg
caacagtctcagcagcgcagcgaacagttgaacctggagctggtgcgtgaagtcgagcag
cgccgccaggttgaacaggacttgcgcgacgcccaggtcggcctccaagacggtatggcg
cgacgcagccaggagctggatgccgccagccttgccctgaataaaagcgaagcgcgcctg
gccatggccctgcaagccagcgaactgggtctttgggattggaacctgcaaaccgacgaa
gtccaccacacccaactcaaggagctgttcggcctggagcccgagtacgtcacggcgatg
ctcagccacctcaagccgcggctgcaccccgacgacctgccgctgctcaagcgtgcgctg
gtggagcatctcaaaggccgtagcgaggactatcaggtggaataccgggtgcgccatggt
gacgggcattgggtgtggatccaggaccgtggccgtgcggtggagcgtgcgcccaacggc
cgcgtgacccgcatgctcggtacgcgccgagatatcagcgcgagtaaggcgctggaagaa
cagcaacggctcgcctcgacggtgttcgaggcggccagcgaaggcatcgtgatcctcgat
cccgagtacgtgctgatcgcggtgaaccaggcattcagccgtgtcaccggttttgacatc
gacgacatgcttggccgcaatgtggtggaactgcccagcagccgcgatgcgcgacgccac
ttcccggtgatccgccaggcgctgctcagccacggtacctggcagggcgagttggtggaa
acgcgcaagaacggcgagctctacccgcagtggctgcaactgaacgtagtgcgcgatgtt
cggggaaacgtcagccatatcgtgggttttttcgccgatctttcggcgcggcgtgaatcc
gaggagcgtatgcgctacctcactcactacgatgaactgaccggcctggccaaccgctcg
ctgtttcgcgaacgcctgcgcgaggcccaccagcgtgtgcgtcagggcgggcgcagcctg
gcgctgctgcatatcaacctggaccgcttcaagttgctcaatgacagcttgggccatgaa
gtggccgaccagttattgcagaaaatggcccggcgtttgatcaacgcgttgcctgaagcc
gacaccattgcgcgcctgtccggtgacgagtttgccgtgctcttcgacgcctacggcaac
ctgtcgagcctggcacgggtggcgacgcggctgctggcaaaactgcgtgtaccggtgacg
gtggaggggcatgagctggtggtcagcgcctcaatgggggtcagtctgctgccggataat
gcgcgggaaatttctgcattggtcagccaatcaaatatggccatgcaacacgccaagcac
ttgggcgggaataatttccagttttacaccgacagcctgcaagccagcaccctggagcgt
ttgcagctggaaaatcacctgcgtaaagccatcgaagagcgtcatttgagtgtgttctac
cagcccaaactgtgcctggccaccggcaagctgaatgccgccgaggcgctgatccgctgg
gagcatccgcaatggggcatggtgccgccgggggactttatcggcctggccgaagaaacc
ggcttgatcgtgccgttgggcgagttcgtgctgcgccaggcgtgttggcaggcttgtgag
tggcagcgccaggggctcgcgccgattcgggtatcagtcaacttgtcggtgcatcagttg
cgccagggcaagctggtcagtctggtgcgccaggtcctggaagaaaccggcctggacccg
caatacctggagctggagctgactgaaagccagttgctcgacagcgttgaacacatcatc
gccaccttccagcagttgcgcgacctgggggtgaaactggccatcgatgactttggcacg
ggttattcgtccctgagctacctcaagcgcattccggtggactacgtgaagatcgaccag
acctttatccgtggccttggccaggggcgtgaggatgcggcgatcacccgtgcaatcatc
gccatggcccatgggttggcgctcaaggtcgtggccgaaggcgtggaagatcagcagcag
ctggagtttctccgcggtgagcagtgcgatgaagtgcagggttatctgatcagccagccg
atgccggccgaagggctggcggatttgttacgcaaaaatgcagatttttcttaa
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