Pseudomonas synxantha LBUM223: VO64_2977
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Entry
VO64_2977 CDS
T03769
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pfb
Pseudomonas synxantha LBUM223
Pathway
pfb03420
Nucleotide excision repair
pfb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
VO64_2977
03430 Mismatch repair
VO64_2977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfb03400
]
VO64_2977
Enzymes [BR:
pfb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VO64_2977
DNA repair and recombination proteins [BR:
pfb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VO64_2977
MMR (mismatch excision repair)
Other MMR factors
VO64_2977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AKA83523
UniProt:
A0AAU8TM57
LinkDB
All DBs
Position
3322003..3324186
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AA seq
727 aa
AA seq
DB search
MRDDLSLLLNSLNDAQRQAVAAPVGRQLVLAGAGSGKTRVLVHRIAWLIQVENASPHSIL
SVTFTNKAAAEMRHRIEQLMGISPAGMWVGTFHGLAHRLLRAHWQEAGLSQTFQILDSDD
QQRLVKRVIRELGLDEQRWPARQAQWFINGQKDEGLRPQHIQASGDLFLATMRSIYEAYE
AACLRAGVIDFSELLLRALDLWRDNPGLLAHYQKRFRHILVDEFQDTNAVQYAWLRLLAK
GGDSLMVVGDDDQSIYGWRGAKIENIYQYSEDFPDAVTIRLEQNYRSTAGILKAANALIA
NNTGRLGKELWTDGGEGEAINLYAAFNEHDEARYVVETIESALKTGLARSDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINIPARGI
GEKTVEAIRDHARHADVSMWEAMRLLIANKGLTGRAAGALGVFVELIENLAAKCAEMPLH
LMTQTVIEQSGLIAYHEAEKGEKGQARVENLEELVSAARAFENTEDDEELTPLAAFLGHA
SLEAGDTQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQNLVMTYAETRRLYGSETYNKVSRFVREVPKGLIQEVRLSNSVSRPFGGGQ
QQNSSTMFSGSEIPETPFSLGQQVRHAIFGEGVILNFEGAGAQARVQVNFAEGSKWLMMG
YAKLEAV
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgatctctcacttttgttgaactccctcaacgatgcccaacgccaggccgta
gcggcccccgttggccgtcagttggtcctggccggtgctggctccggtaaaacccgagtg
ctggtgcaccgtatcgcctggttgatccaggtcgaaaacgcgtccccgcactccatcttg
tcggtgacctttaccaacaaggccgctgccgagatgcgccatcgtatcgagcagttgatg
ggcatcagcccggccggcatgtgggtgggcactttccacggcctggcgcaccgcctgttg
cgggcgcattggcaggaagcggggctgagccagaccttccagattctcgacagcgacgac
cagcaacgcctggtcaagcgcgtgatccgcgaactgggcctcgacgaacagcgttggccg
gcgcgccaggcccaatggtttatcaatggtcagaaggacgagggcctgcgcccgcagcat
atccaggccagcggcgatctgttcctggctaccatgcgcagcatttatgaagcctacgag
gcggcgtgtttgcgtgcaggcgtgatcgacttctccgaactgttgctgcgcgccctcgac
ctgtggcgtgacaaccccggtttgctggcccattaccagaagcgcttccgccatatcctg
gtggacgagttccaagacaccaacgccgtgcagtacgcctggttgcgcctgctggccaag
ggcggcgacagcctgatggtggtgggtgatgacgaccagtcgatctacggctggcgcggc
gcgaaaatcgagaacatctaccagtactccgaagatttcccggacgcggtgaccattcgc
ctggagcagaactaccgctccaccgccgggatcctcaaggctgccaatgccttgatcgcc
aacaacaccgggcgcctgggcaaagagctgtggaccgacggcggcgaaggcgaagcgatc
aacctgtacgcggcgttcaacgagcacgatgaagcgcgctacgtggtggaaaccatcgaa
agcgcgctgaaaaccggcctggcgcgcagcgatatcgcgatcctgtaccgttccaacgcc
cagtcgcgggtactggaagaagccttgctgcgcgagcgtatcccctaccgcatctacggc
ggccagcgctttttcgaacgtgccgaaatcaagaacgccatggcctacctgcgcttgctg
gaaggccgtggcaacgatgcggcactggagcgggtgatcaatatcccagcccgtggcatc
ggcgagaaaaccgtcgaagcgatccgcgaccatgcacgccatgccgatgtgtcgatgtgg
gaagccatgcgtttgctgatcgccaacaaaggcctgaccggccgcgctgccggggctctg
ggtgtgtttgtcgagttgatcgagaacctcgccgccaagtgcgcagaaatgcccctgcac
ctgatgacccagaccgtgatcgagcagtccgggctgatcgcttaccacgaagcggaaaaa
ggcgagaaaggccaggcccgggtagaaaaccttgaggaactggtcagcgccgcccgcgcc
ttcgaaaataccgaggacgacgaagagctgacgccgctcgccgccttcctgggtcacgcg
tcgctggaagctggcgatacccaggccgatgagcacgaagacagcatccagctgatgacc
ttgcacagcgccaaaggcctggagtttccgtatgtgttcctggtgggcatggaagaaggc
ctgttcccccacaagatgagcctggaagaacccggccgcctcgaggaagaacgccgcctg
gcctatgtgggcattacccgggcgatgcagaacctggtgatgacttacgccgagacccga
cgcctgtacggcagcgagacctacaacaaggtgtcgcgctttgtacgtgaagtgccgaaa
gggctgatccaggaagtgcgcctgtccaacagcgtcagccgcccgttcggcggcggccag
cagcagaactccagcaccatgttctcaggttccgagattccggaaaccccgttcagcctg
ggtcagcaggtcaggcatgcgatcttcggcgagggcgtgattctcaacttcgaaggcgcc
ggtgcccaggcgcgggtgcaggtgaacttcgccgaaggcagcaagtggctgatgatgggc
tacgcaaagctcgaagcggtctaa
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