Pseudomonas synxantha LBUM223: VO64_3310
Help
Entry
VO64_3310 CDS
T03769
Name
(GenBank) Transcription accessory protein (S1 RNA-binding domain)
KO
K06959
protein Tex
Organism
pfb
Pseudomonas synxantha LBUM223
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
VO64_3310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
S1_RRP5
YqgF
HHH_7
T2SSK
HHH_6
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AKA83856
UniProt:
A0AAU8TQJ5
LinkDB
All DBs
Position
complement(3729806..3732130)
Genome browser
AA seq
774 aa
AA seq
DB search
MDSINSRIAEELGVRPQQVEAAVALLDEGSTVPFIARYRKEVTGSLDDTQLRHLEERLRY
LRELDERRISILASIEEQGKLTPQLERDIKLADTKTRLEDLYLPYKQKRRTKGQIALEAG
LGDLADGLFDDPSLTPESEAARFIDAEKGVADVKAALEGAKYILMERFAENASLLEKLRT
YLKQEAILSARVIAGKEEEGAKFRDYFEHDEPLKSMPSHRALAIFRGRNEGILSSSLKVG
EELPGAMHPCEGMIAQQFGIQNQNRPADKWLGEVVRWTWKVKLYTHLETDLLGELRDGAE
TEAINVFAHNLHDLLLAAPAGPRATLGLDPGLRTGCKVAVVDATGKLLDHATVYPHVPHN
KWDQTLAILAALCAKHAVDLIAIGNGTASRETDKLAAELIKKYPAMKMTKVMVSEAGASV
YSASELASKEFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQLKLARG
LDAVVEDCVNAVGVDVNTASVALLARISGLNATLAQNIVSHRDENGAFKTRAALKKVARL
GEKTFEQAAGFLRVMNGDNPLDASAVHPEAYPLVQRIAAETDRDIRSLIGDAAFLKRLDP
KKYTDETFGVPTITDILQELEKPGRDPRPEFKTAEFQDGVEDLKDLQPGMILEGVVTNVT
NFGAFVDIGVHQDGLVHISALSEKFIKDPREAVKAGDVVKVKVMEVDIPRKRVGLSMRMS
DTPGEKIDGARGARPGSAPRQSQNNAPRKETATAAPSNNAMASLFANAKQLKKR
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggacagcatcaacagccgcatcgccgaggaactcggtgtacgcccacaacaggtcgaa
gcggccgtcgctctactggatgaaggctccacggtgcctttcatcgcccgttaccgaaag
gaagtgaccggcagcctcgacgatacccaactgcggcacctggaagagcgcctgcgctac
ctgcgagaactcgacgaacggcgtatcagcatcctcgccagcatcgaggaacagggcaag
ctgacccctcaactggaacgcgacatcaagctggcggacaccaagacccgcctagaagac
ctttacctgccgtataaacagaaacgtcgtacaaagggtcaaatcgccctggaagccggt
ctcggtgatttggccgatggcctgttcgacgatccgtcgctgacgccggaaagcgaagcc
gctcgcttcatcgacgctgaaaaaggcgtcgccgacgtcaaggccgccctcgaaggcgcc
aagtacatcctgatggagcgcttcgccgaaaacgccagcctcctggaaaaactgcgtacc
tacctgaagcaggaagccatcctcagcgcccgtgttatcgccggcaaagaggaagaaggc
gccaaattccgcgactacttcgagcacgacgaaccgctcaaaagcatgccgtcccaccgc
gccctggcgattttccgcggtcgcaacgaaggtattctcagctcctcgctgaaagtcggc
gaggagctaccgggcgccatgcacccgtgcgaaggcatgatcgctcaacaattcggcatc
caaaatcagaaccgtcctgcggacaagtggctcggtgaagtcgtgcgctggacctggaag
gtcaagctctatactcacctggaaaccgacctgctcggcgaactgcgcgacggcgctgaa
accgaggcgatcaacgtgttcgcccacaacctgcacgacctgctgctggctgcaccggcc
ggcccgcgtgccacgttgggccttgacccgggcctgcgtaccggttgcaaggtcgctgtg
gtcgacgccaccggcaagctgctggaccacgccaccgtgtacccccacgtgccacataac
aaatgggaccagaccctggcgatccttgcagccctgtgcgccaagcacgcggtggacctg
atcgccatcggcaacggcaccgccagccgtgaaaccgacaagctggccgccgaactgatc
aagaaatacccagccatgaagatgaccaaggtcatggtctccgaggcaggcgcttcggtg
tactcggcgtcggagctggcttccaaggaattcccggacctcgacgtgtcgatccgtggc
gccgtctccatcgcccgtcgcctgcaagacccattggccgaattggtgaagatcgaccct
aaatccatcggtgtcggccagtaccagcacgacgtgtcgcagctgaaactggcgcgcggc
ctggatgcggtcgtggaagactgtgtaaacgccgtgggcgtggacgtgaacaccgcctcc
gtggcgctgctggcgcgcatttccggcctcaacgcaaccctggcgcagaacatcgtcagc
caccgtgacgagaacggcgcgttcaaaacccgcgccgcgctgaaaaaagtcgcacgcctg
ggtgaaaaaaccttcgaacaggcagccggcttcctgcgcgtgatgaatggcgacaacccg
ctggatgcctcggcagttcacccggaagcctaccccctggtgcagcgcattgccgccgag
accgatcgcgatatccgttcgctgatcggcgatgccgcgttcctcaagcgcctggacccg
aagaagtacaccgacgaaaccttcggcgtgccgaccatcaccgacatcctgcaagagctg
gaaaaacctggacgcgacccacgcccggagttcaagaccgctgagttccaggacggtgtc
gaagacctcaaggacctgcaaccgggcatgatcctagaaggcgtggtgaccaacgtgacc
aacttcggcgctttcgtggatatcggtgtgcatcaggacggattggtgcatatctccgcg
ctttcggagaaattcatcaaggacccgcgcgaagcggtgaaagccggcgatgtggtcaag
gtcaaggtcatggaagtcgacatcccgcgcaagcgcgtcggcctgtcgatgcgcatgagc
gacacccctggcgagaaaatcgacggcgcccgtggcgcgcgtccgggctcggcaccgcgc
cagtcgcaaaacaacgcgccacgcaaggaaaccgcgacggccgcgccgagcaacaacgcc
atggcatcgctgttcgctaatgccaaacagttgaagaagcgttga
DBGET
integrated database retrieval system
