Pseudomonas synxantha LBUM223: VO64_3479
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Entry
VO64_3479 CDS
T03769
Name
(GenBank) Helicase PriA essential for oriC/DnaA-independent DNA replication
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pfb
Pseudomonas synxantha LBUM223
Pathway
pfb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VO64_3479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfb03400
]
VO64_3479
Enzymes [BR:
pfb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VO64_3479
DNA repair and recombination proteins [BR:
pfb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VO64_3479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
WHD_PriA
Zn_ribbon_6
AAA_30
HypA
iSirtuin
TrwB_AAD_bind
PIF1
AAA_22
Zeta_toxin
ADDB_N
Zn_ribbon_3
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
AKA84025
UniProt:
A0AAU8TYF9
LinkDB
All DBs
Position
complement(3904618..3906837)
Genome browser
AA seq
739 aa
AA seq
DB search
MPDAILRLALPSPLRRLFDYRAPAGVLRAQLQPGMRVRVPFGRREMIGILVEVTDHSEVP
AEKLKPALAILDTTPPLPPELFKLCLWTAQYYQHSLGDTLSWALPVLLRQGELAEARQER
FWSMAPGARLDDPRIARAPRQREALATLAQHPHGVAHQLLSKLMLSKDSLDLLLAKGLVQ
VEIRKHAPDPRHEHWLAQPELPLNPEQRAAYEAIRAGFDSFHAFLLAGVTGSGKTEVYLQ
LIRETLQAGKQALVLIPEINLGPQTLARFEQRFNARIALVHSAVNDRERLESWLAARDGE
ADIIIGTRSALFTPMKNPGLIIIDEEHDGSYKQQEGLRYHARDLALVRARQEDIPIVLGS
ATPSLESLHNAYNGRYGLLRLNERAGGAKQPRFLRLDVKSRPLDSGISGPMQQAIGQTLA
AGQQVLVFLNRRGFAPTLLCHDCGWMSGCERCDARMTVHQRYGELRCHHCGHVERVPRHC
PQCGKVDLRPVGAGTERAEERLGILFPDYPVLRVDRDSTSRKDAMNQLFATIQKGQPCIL
VGTQMLAKGHHFPRVTLVSILDADGGLFSGDFRASERMAQLIVQVAGRAGRAEEPGRVII
QTHLADHPLLIQLTEQGYFAFAEQALSERRAAGLPPFAHLALLRAEAHKPGQAEGFLDEA
CSAAEGLLGELSLSGIELLGPVPAPMERRAGRYRAQLLLQATSRAPLHRLLSRWMLELEQ
IPSGRQVRWSLDVDPVDLY
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgacgccattttgcgcctagccctgccctcgcccctgcgccgcctgttcgattac
cgggctccggccggggtgctgcgggcgcagttgcagccggggatgcgcgtacgcgtgccg
ttcgggcggcgtgagatgatcggcatcctggtagaagtcaccgatcacagcgaagtcccg
gcggagaaactcaaaccggcgctggccatcctcgataccacgccaccactgccgcctgag
ctgttcaagctgtgcctgtggaccgcgcagtattaccagcacagcctcggcgataccttg
agctgggctttgccggtgctgctgcgccagggcgaactggccgaagcgcgacaggaacgt
ttctggtcgatggcgcccggtgcacgcctggacgacccgcgtatcgcccgcgccccgcgc
cagcgtgaagccctggccacactggcccagcatccccatggcgtcgcccatcagctgtta
agcaagctgatgctgagcaaagacagcctcgacctgctgttggccaagggcctggtgcag
gtggaaatccgcaagcacgcccccgacccgcgccacgaacactggctggcccaaccggaa
ttgccgctcaaccccgagcaacgcgccgcgtatgaggcgatccgcgcagggttcgacagt
ttccatgcgttcctgctggccggcgtcaccggcagtggcaagaccgaagtgtatctgcaa
ctgatccgcgaaaccctgcaggccggcaagcaggcactggtgctgatccccgagatcaac
ctgggcccacagaccctggcgcgtttcgaacagcgcttcaacgcccgcatcgccctggtg
cactcggcggtcaatgaccgtgagcgcctggagtcgtggctggcggcgcgggacggtgag
gccgacatcatcataggcacccgttcggcgctgttcaccccgatgaagaaccccgggctg
atcatcatcgacgaggaacacgacggctcctataaacaacaggaaggcctgcgctaccac
gcccgcgacctggcactggtgcgcgcacgccaggaagacatcccgattgtgctgggctcg
gccacgccgtccctggaaagcctgcacaacgcctacaacggacgctacgggctgctacgc
ctgaatgagcgcgccggcggtgccaagcaaccacgcttcctgcgcctggacgtaaagagc
cgcccgctggacagtggtatctccggcccgatgcaacaggccatcggccagacccttgcc
gcaggccaacaagtgttggtgtttctcaatcgccgtggctttgccccgacgctgctgtgc
catgactgcggttggatgtccgggtgcgaacgctgcgatgcacgcatgaccgtgcaccag
cgctatggcgaactgcgctgccaccactgcggccatgtagagcgggtgccacgccattgc
ccgcagtgcggcaaggtcgacctgcgcccggtaggggccggcaccgagcgcgccgaggag
cgcctgggcattctgtttccggattacccggtgctgcgggtcgaccgcgacagcacctcg
cgcaaagacgcgatgaaccagttgtttgccaccattcagaaaggccagccgtgcatcctg
gtgggcacgcaaatgcttgccaaagggcatcacttcccgcgggtgaccctggtgtcgatc
ctggacgccgacggcgggttgttctccggggatttccgcgccagcgaacgcatggcgcag
ttgatcgtgcaggtggcagggcgcgccggacgggccgaagagccgggcagggtgattatc
cagacgcacctggccgaccatccattgctgattcaactgacggaacaaggctactttgcc
ttcgccgagcaggccttgagtgaacgccgtgccgctggcctgccgccctttgcacacctg
gcattgttgcgtgccgaggcgcataaaccgggacaagccgaaggtttcctggatgaagcc
tgcagtgccgccgagggtttgctgggtgaattgagtctgagcggcatcgaattgctcggg
ccggtacccgcccccatggagcgtcgcgccggacgttatcgcgctcagctactcttgcag
gcaacctcccgtgcgccgctgcatcggctattaagtcgctggatgcttgagctggagcaa
atacccagcggccgacaagtgcgatggtcactggacgtagacccggtagatttatactga
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