KEGG   Pseudomonas synxantha LBUM223: VO64_3688
Entry
VO64_3688         CDS       T03769                                 
Name
(GenBank) DNA-binding protein Fis
  KO
K03557  Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
pfb  Pseudomonas synxantha LBUM223
Brite
KEGG Orthology (KO) [BR:pfb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pfb03000]
    VO64_3688
   03036 Chromosome and associated proteins [BR:pfb03036]
    VO64_3688
   03400 DNA repair and recombination proteins [BR:pfb03400]
    VO64_3688
Transcription factors [BR:pfb03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    VO64_3688
Chromosome and associated proteins [BR:pfb03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    VO64_3688
DNA repair and recombination proteins [BR:pfb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      VO64_3688
SSDB
Motif
Pfam: HTH_8 Fis_N DUF6507 Xre-like-HTH DUF134
Other DBs
NCBI-ProteinID: AKA84234
LinkDB
Position
complement(4161231..4161509)
AA seq 92 aa
MSDNVNLKQHLNTPSEEGQTLRGSVEKALHNYFAHLEGASVTDVYNLVLSEVEAPLLESV
MNYVKGNQTKASELLGLNRGTLRKKLKQYDLL
NT seq 279 nt   +upstreamnt  +downstreamnt
gtgagcgacaacgtcaatttgaaacagcacctcaatacgccgagcgaagaaggccagacc
cttcgcgggagtgtcgagaaggcgctgcacaattatttcgcccaccttgagggcgcttcc
gtcacggacgtgtacaacctggtgctctccgaagtcgaggcgcccttgctcgaaagcgtg
atgaactacgtcaagggcaaccagaccaaagccagtgagctgctgggcctcaaccgtggg
accttgcgcaaaaagctcaagcagtacgatttgctgtaa

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