Pseudomonas synxantha LBUM223: VO64_3688
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Entry
VO64_3688 CDS
T03769
Name
(GenBank) DNA-binding protein Fis
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
pfb
Pseudomonas synxantha LBUM223
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfb03000
]
VO64_3688
03036 Chromosome and associated proteins [BR:
pfb03036
]
VO64_3688
03400 DNA repair and recombination proteins [BR:
pfb03400
]
VO64_3688
Transcription factors [BR:
pfb03000
]
Prokaryotic type
Helix-turn-helix
Other families
VO64_3688
Chromosome and associated proteins [BR:
pfb03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
VO64_3688
DNA repair and recombination proteins [BR:
pfb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
VO64_3688
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_8
Fis_N
DUF6507
Xre-like-HTH
DUF134
Motif
Other DBs
NCBI-ProteinID:
AKA84234
LinkDB
All DBs
Position
complement(4161231..4161509)
Genome browser
AA seq
92 aa
AA seq
DB search
MSDNVNLKQHLNTPSEEGQTLRGSVEKALHNYFAHLEGASVTDVYNLVLSEVEAPLLESV
MNYVKGNQTKASELLGLNRGTLRKKLKQYDLL
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacaacgtcaatttgaaacagcacctcaatacgccgagcgaagaaggccagacc
cttcgcgggagtgtcgagaaggcgctgcacaattatttcgcccaccttgagggcgcttcc
gtcacggacgtgtacaacctggtgctctccgaagtcgaggcgcccttgctcgaaagcgtg
atgaactacgtcaagggcaaccagaccaaagccagtgagctgctgggcctcaaccgtggg
accttgcgcaaaaagctcaagcagtacgatttgctgtaa
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