Pseudomonas synxantha LBUM223: VO64_3892
Help
Entry
VO64_3892 CDS
T03769
Name
(GenBank) Ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
pfb
Pseudomonas synxantha LBUM223
Pathway
pfb00330
Arginine and proline metabolism
pfb00480
Glutathione metabolism
pfb01100
Metabolic pathways
pfb01110
Biosynthesis of secondary metabolites
pfb04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
VO64_3892
09106 Metabolism of other amino acids
00480 Glutathione metabolism
VO64_3892
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
VO64_3892
Enzymes [BR:
pfb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
VO64_3892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AKA84438
UniProt:
A0A0R2ZKA5
LinkDB
All DBs
Position
complement(4387216..4388379)
Genome browser
AA seq
387 aa
AA seq
DB search
MSINVEDYFARATFDKMKAFADKQETPFVVIDTAMISQAYDDLRAGFEFAKVYYAVKANP
AVEIIDLLKDKGSSFDIASIYELDKVMDRGVSADRISYGNTIKKSKDIRYFYEKGVRLFS
TDSEADLRNIAKAAPGSKVYVRILTEGSTTADWPLSRKFGCQTDMAMDLLILARDLGLVP
YGISFHVGSQQRDISVWDAAIAKVKVIFERLKEEDGIELKLINMGGGFPANYITRTNSLE
TYAEEIIRFLKEDFGDDLPEIILEPGRSLIANAGILVSEVVLVARKSRTAVERWVYTDVG
KFSGLIETMDEAIKFPIWTEKKGEMEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRLY
WLSTGAYTTSYSAVEFNGFPPLKSFYV
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcaacgtcgaagactatttcgcgcgcgccacctttgacaaaatgaaggcgttc
gccgacaagcaagaaaccccgttcgtggtgatcgacaccgcgatgatcagccaggcctac
gatgacctgcgcgccggtttcgaattcgccaaggtgtattacgcggtcaaggccaacccg
gccgtggagatcatcgacctgttgaaagacaagggttcgagcttcgacatcgcctcgatc
tacgagctggacaaggtcatggaccgcggcgtcagcgccgaccgtatcagctacggcaac
accatcaagaaatccaaggacatccgctacttctatgagaagggcgtgcgcctgttctcc
accgactccgaagccgacctgcgcaacatcgccaaggccgcgccgggttcgaaagtgtat
gtgcgcatcctcaccgaaggctcgaccacggccgactggcctttgtcgcgcaaattcggc
tgccagaccgacatggccatggacctgctgatcctcgcccgcgacctgggcctggtgccg
tacggcatctcgttccacgtcggctcgcaacagcgcgacatcagcgtgtgggacgcggcg
atcgccaaggtcaaggtgatcttcgaacgtttgaaagaagaagatggcattgagctgaag
ctgatcaacatgggcggcggcttcccggccaactacatcacccgcaccaacagcctggag
acctacgccgaagaaatcatccgtttcctcaaggaagatttcggcgacgacctgccggaa
atcatcctggagccaggccgctcgttgatcgccaacgccggcatcctggtcagtgaagtg
gtgctggttgcacgtaaatcgcgcaccgccgtcgagcgttgggtgtataccgatgtgggc
aagttctccggcctgatcgaaaccatggacgaagccatcaagttcccgatctggaccgag
aagaaaggcgagatggaagaagtggtcatcgccggccccacctgcgacagcgccgatatc
atgtacgagaactacaagtacggtttgccgttgaacctggcgattggtgatcgtttgtac
tggttgtcgaccggtgcctacaccaccagctacagcgcagttgagttcaacgggtttccg
ccgttgaaatcgttctacgtgtaa
DBGET
integrated database retrieval system