Pseudomonas synxantha LBUM223: VO64_3961
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Entry
VO64_3961 CDS
T03769
Name
(GenBank) Hypothetical ATP-binding protein UPF0042, contains P-loop
KO
K06958
RNase adapter protein RapZ
Organism
pfb
Pseudomonas synxantha LBUM223
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfb03019
]
VO64_3961
Messenger RNA biogenesis [BR:
pfb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
VO64_3961
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
AAA_28
CoaE
AAA_22
AAA_29
nSTAND_NTPase5
FtsK_SpoIIIE
RsgA_GTPase
T2SSE
ABC_tran
SKI
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AKA84507
UniProt:
A0AAU8U182
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All DBs
Position
complement(4467180..4468037)
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AA seq
285 aa
AA seq
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MRLIIVSGRSGSGKSTALNVLEDNGFYCIDNLPAGLLPELAERALIHTELAQPLVAVSID
ARNLPSHLSRFPELLEEVRAKHIHCDVLYLDADEETLLKRFSETRRRHPLSSANRSLAEA
IQDETKLLGPIIDLADLKINTTNLNLYQLRDAIKLRLLNQPEPGTAFLVESFGFKRGMPV
DADLVFDVRCLPNPYWKPELRDQSGLDQPVVDYLAAQPDVEEMFQDISSYLLKWLPRFAA
SNRAYVTIAIGCTGGHHRSVYLTERLGQVLQQTLKNVQVRHRDLS
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttgatcatcgtcagcggccgttccggctcaggtaaaagcaccgccctcaacgtc
cttgaggacaacggtttctattgcatcgacaatttgcccgccggcctgctgccggagctg
gcggaacgcgcactgatccatactgaactggcgcaacccctggtagctgtgtctatcgat
gcccgcaacctgcccagccacctctcgcggttcccggaactgctggaagaagtgcgcgcc
aagcatattcattgcgatgtgctgtacctggatgccgacgaagaaacgttgctcaaacgc
ttctcagaaacccgtcgtcgccacccgctcagcagcgccaaccgctccctggccgaagcc
atccaggacgagaccaagctgctcgggccgatcattgatctggctgatcttaagatcaac
accaccaacctgaacctgtatcagctgcgcgacgcgatcaagctgcgcctgctgaaccag
ccagagcccgggactgcgttcctggtcgaatcattcggtttcaaacgtggcatgccggtg
gatgccgacctggtgttcgacgtacgctgcctgcccaacccctattggaagccggaactg
cgcgatcaatccggcttggaccaacccgtggtcgattacctggccgcgcagccggatgta
gaagagatgttccaggacatctccagctacctgctcaaatggttaccgcgctttgccgcg
agcaaccgcgcctacgtcaccattgccattggctgcactggcggccaccatcgctccgtc
tatctgacggaacggctgggccaggtgctgcaacaaaccctcaagaacgtccaggtccgc
caccgcgaccttagctga
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