KEGG   Pseudomonas synxantha LBUM223: VO64_4165
Entry
VO64_4165         CDS       T03769                                 
Name
(GenBank) Sigma factor, ECF subfamily
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
pfb  Pseudomonas synxantha LBUM223
Pathway
pfb02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pfb00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    VO64_4165
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pfb03021]
    VO64_4165
Transcription machinery [BR:pfb03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     VO64_4165
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_23 HTH_20 HTH_24 GerE Xre-like-HTH HTH_28 HTH_40 HTH_5 Trp_repressor HTH_10 HTH_IclR TnsD HTH_11
Other DBs
NCBI-ProteinID: AKA84711
LinkDB
Position
complement(4686710..4687207)
AA seq 165 aa
MIALQPSNTVEVLYNDHHHWLTGWLRRKLGCPENAADLAQDTFIRVLSARDTPTLIEPRA
FLTTVAKRVLFNFYRRQDLERAYLDALAQMPEHVAPSEEDRAIILQTLLELDQLLDGLPR
LVKRAFLLAQLDGLTYAQISAELGISIATVKRHLTKAAMRCYFAL
NT seq 498 nt   +upstreamnt  +downstreamnt
gtgatcgcgttgcagccgtccaataccgtcgaagttctgtacaacgaccatcaccactgg
ctcaccggctggttgcgacgcaagctcggctgcccggaaaacgccgccgacctggcgcag
gacaccttcatccgcgtgctcagcgcaagggacaccccgaccctgatcgaaccccgcgcc
ttcctcaccaccgtggccaagcgcgtattgttcaacttctatcgccgccaggacctggag
cgcgcctacctcgatgccttggcgcaaatgcccgagcacgtcgcaccgtcggaagaagac
cgcgcaatcatcctgcaaaccctgctggagctggaccaactgctcgatggcttgcccagg
ctggtcaagcgggccttcctgctcgcccagctcgatggcctgacctacgcgcagatcagc
gctgaactgggcatctccatcgccaccgtcaagcgccacctgaccaaagcggccatgcgc
tgttacttcgcgttatga

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