KEGG   Pseudomonas synxantha LBUM223: VO64_4174
Entry
VO64_4174         CDS       T03769                                 
Name
(GenBank) DNA-binding protein HU-beta
  KO
K03530  DNA-binding protein HU-beta
Organism
pfb  Pseudomonas synxantha LBUM223
Brite
KEGG Orthology (KO) [BR:pfb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pfb03032]
    VO64_4174
   03036 Chromosome and associated proteins [BR:pfb03036]
    VO64_4174
   03400 DNA repair and recombination proteins [BR:pfb03400]
    VO64_4174
DNA replication proteins [BR:pfb03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    VO64_4174
Chromosome and associated proteins [BR:pfb03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    VO64_4174
DNA repair and recombination proteins [BR:pfb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      VO64_4174
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 SSPI
Other DBs
NCBI-ProteinID: AKA84720
UniProt: A0A0R2Z9H6
LinkDB
Position
4695364..4695645
AA seq 93 aa
MALTKDQLIADIAEAIDAPKTTARAALDQLGQIVADQLENGGEITLPGIGKLKVTERPAR
TGRNPSTGAAIEIAAKKVIKLVVAKGLTDAVNK
NT seq 282 nt   +upstreamnt  +downstreamnt
atggctttgactaaagaccaactgatcgctgatatcgctgaagctatcgacgcgccaaaa
accaccgcgcgtgctgctctggaccaactgggccagatcgttgctgatcagctggaaaac
ggcggcgaaatcactctgccaggcattggcaagctgaaagtgaccgagcgtcctgcccgt
actggccgtaacccttcgactggcgctgccatcgaaatcgctgccaagaaagttatcaag
ctggttgtggctaaaggcctgaccgacgctgttaacaagtaa

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