KEGG   Pseudomonas synxantha LBUM223: VO64_4187
Entry
VO64_4187         CDS       T03769                                 
Name
(GenBank) Ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
pfb  Pseudomonas synxantha LBUM223
Pathway
pfb03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pfb00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    VO64_4187
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pfb03019]
    VO64_4187
   03009 Ribosome biogenesis [BR:pfb03009]
    VO64_4187
   03036 Chromosome and associated proteins [BR:pfb03036]
    VO64_4187
Enzymes [BR:pfb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     VO64_4187
Messenger RNA biogenesis [BR:pfb03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     VO64_4187
Ribosome biogenesis [BR:pfb03009]
 Eukaryotic type
  90S particles
   RNase
    VO64_4187
 Prokaryotic type
  rRNA processing factors
   VO64_4187
Chromosome and associated proteins [BR:pfb03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     VO64_4187
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase
Other DBs
NCBI-ProteinID: AKA84733
UniProt: A0A0E3KH36
LinkDB
Position
4707918..4708607
AA seq 229 aa
MTVSLSRLERQLGYTFKDQELMVLALTHRSFAGRNNERLEFLGDAILNFAAGEALFERFP
QAREGQLSRLRARLVKGETLAVLARGFGLGEYLRLGSGELKSGGFRRESILADALEALIG
AIYLDAGMETAKERVVAWLASEIESLTLVDTNKDPKTRLQEYLQSRGCELPRYEVVDIQG
EPHCRVFFVECEITLLNEKSRGQGVSRRIAEQVAAAAALIALGVENGHD
NT seq 690 nt   +upstreamnt  +downstreamnt
gtgaccgtttctctaagccgtctcgagcgccagctcggctataccttcaaggaccaggaa
ttgatggtccttgccctcacacaccgcagctttgcagggcgcaataacgagcgcctggaa
ttcctcggtgatgccatcctcaatttcgccgccggtgaggcgctgttcgagcgttttccg
caagcgcgcgaaggccagctttcgcgcctgcgggctcgccttgtgaaaggcgagaccctg
gccgtgctggcccgcggtttcggcttgggcgagtacctgcggctagggtccggtgagttg
aaaagcggcggtttccgtcgcgaatcgattctggccgatgccctggaagcattgatcggt
gcgatctacctcgatgcaggaatggagacggccaaggagcgcgtggttgcctggctggca
tcggaaatcgaaagcctgacactggtcgacaccaacaaagatcccaagacccgcctgcag
gaatacctgcagtcccgcggttgcgaactgccacgctacgaagtggtagatatccagggt
gagccccattgccgcgtgttcttcgtggaatgtgaaatcaccttattgaacgaaaaaagc
cgaggtcagggtgtgagccgtcgtattgccgaacaggtagcggccgctgcagcactgatt
gccctgggcgtggagaatggccatgactga

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