Pseudomonas synxantha LBUM223: VO64_4187
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Entry
VO64_4187 CDS
T03769
Name
(GenBank) Ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pfb
Pseudomonas synxantha LBUM223
Pathway
pfb03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
VO64_4187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfb03019
]
VO64_4187
03009 Ribosome biogenesis [BR:
pfb03009
]
VO64_4187
03036 Chromosome and associated proteins [BR:
pfb03036
]
VO64_4187
Enzymes [BR:
pfb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
VO64_4187
Messenger RNA biogenesis [BR:
pfb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
VO64_4187
Ribosome biogenesis [BR:
pfb03009
]
Eukaryotic type
90S particles
RNase
VO64_4187
Prokaryotic type
rRNA processing factors
VO64_4187
Chromosome and associated proteins [BR:
pfb03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
VO64_4187
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
AKA84733
UniProt:
A0A0E3KH36
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All DBs
Position
4707918..4708607
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AA seq
229 aa
AA seq
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MTVSLSRLERQLGYTFKDQELMVLALTHRSFAGRNNERLEFLGDAILNFAAGEALFERFP
QAREGQLSRLRARLVKGETLAVLARGFGLGEYLRLGSGELKSGGFRRESILADALEALIG
AIYLDAGMETAKERVVAWLASEIESLTLVDTNKDPKTRLQEYLQSRGCELPRYEVVDIQG
EPHCRVFFVECEITLLNEKSRGQGVSRRIAEQVAAAAALIALGVENGHD
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgtttctctaagccgtctcgagcgccagctcggctataccttcaaggaccaggaa
ttgatggtccttgccctcacacaccgcagctttgcagggcgcaataacgagcgcctggaa
ttcctcggtgatgccatcctcaatttcgccgccggtgaggcgctgttcgagcgttttccg
caagcgcgcgaaggccagctttcgcgcctgcgggctcgccttgtgaaaggcgagaccctg
gccgtgctggcccgcggtttcggcttgggcgagtacctgcggctagggtccggtgagttg
aaaagcggcggtttccgtcgcgaatcgattctggccgatgccctggaagcattgatcggt
gcgatctacctcgatgcaggaatggagacggccaaggagcgcgtggttgcctggctggca
tcggaaatcgaaagcctgacactggtcgacaccaacaaagatcccaagacccgcctgcag
gaatacctgcagtcccgcggttgcgaactgccacgctacgaagtggtagatatccagggt
gagccccattgccgcgtgttcttcgtggaatgtgaaatcaccttattgaacgaaaaaagc
cgaggtcagggtgtgagccgtcgtattgccgaacaggtagcggccgctgcagcactgatt
gccctgggcgtggagaatggccatgactga
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