Pseudomonas synxantha LBUM223: VO64_4189
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Entry
VO64_4189 CDS
T03769
Name
(GenBank) DNA recombination and repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
pfb
Pseudomonas synxantha LBUM223
Pathway
pfb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VO64_4189
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfb03400
]
VO64_4189
DNA repair and recombination proteins [BR:
pfb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
VO64_4189
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
VO64_4189
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
AKA84735
UniProt:
A0AAU8TQS8
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Position
4709667..4710356
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AA seq
229 aa
AA seq
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MSQSPPPSQLAYVLHSRAYRETSALVDFLTPQGRLRAVLRSARGKAGTLARPFVALDVEF
RGKGELKNVGRLESVGTSAWLNGDALFSGLYLNELLIRLLPAEDPHPAVFDHYAATLLAL
AEGRPLEPLLRAFEWRLLDDLGYGFELSNDLHGEPIAADGMYRLQVDAGLERVYLLQPGL
FQGSELLAMSDADWTAPGALSAAKRLMRQALAVHLGGRPLVSRELFRKP
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaatccccgcctcccagccaactcgcctacgtgctgcacagccgcgcctatcgt
gagaccagcgctttggtggacttcctcacgcctcaaggccgcttgcgcgcggtattgcgc
agtgcgcgaggcaaggcgggtacgttggcgcggccgttcgtggccctggatgtggagttt
cgcggcaagggcgagctgaagaacgtcggccgcctggaaagcgtcggcaccagcgcctgg
ctaaatggggatgcactgttcagtggcctttacctcaatgaactgctgatccgcctgttg
cccgccgaagacccgcacccggcggtcttcgatcactacgccgccacgttgctggccctg
gccgaaggccggcccctggagccgttgctgcgcgccttcgaatggcgcttgctcgacgac
cttggctacggcttcgaactgagtaacgacctgcacggcgagcccatcgccgccgatggc
atgtaccgcctgcaagtggacgctggcctggagcgtgtgtacctgctgcaaccgggcctg
ttccagggctccgaactgctggccatgagtgacgcggattggactgcgccgggtgccttg
tccgccgccaagcgtttgatgcgccaggccctggccgtgcatctgggcgggcggccgctg
gtcagtcgcgagttgtttcgaaagccctga
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