Pseudomonas synxantha LBUM223: VO64_4459
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Entry
VO64_4459 CDS
T03769
Name
(GenBank) tRNA pseudouridine 13 synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pfb
Pseudomonas synxantha LBUM223
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfb03016
]
VO64_4459
Enzymes [BR:
pfb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
VO64_4459
Transfer RNA biogenesis [BR:
pfb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VO64_4459
Prokaryotic type
VO64_4459
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AKA85005
UniProt:
A0AAU8TRJ9
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All DBs
Position
4993637..4994695
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AA seq
352 aa
AA seq
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MNDLQLLGPRAYGEALGSAVLKATAEDFQVDEVLDIPLTGEGEHLWLWVEKRGLNTEEAA
RRIAKAAGVPLRTVSYAGLKDRQALTRQWFSVQLPGKADPDLSGAENDTLKILKTTRHKR
KLQRGAHSANGFTLRLTQLAGDTAAIDARLQLIAQHGIPNYFGAQRFGHNGGNVVDAREW
AARKALPEQRNVRSRLLSTARSYLFNKVLAARVADGSWQRAQVGDLLAFTDSRSFFPAGE
AECSDPRLAILDLHPTGPQWGEGDSPATGLTHELEQSVAASEADLRDWLVNAGMSQERRI
LRLPIGGLTWHYPGPDILQLEFVLPAGCFATVLVRELVDLVPVGQTDSPCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacctgcaactgctgggcccacgggcctacggcgaggccttgggcagcgcggta
ctgaaggcgacggctgaagacttccaggtggatgaggtgctggacatcccgctgaccggc
gagggcgagcacctgtggctgtgggtggaaaaacgcggcttgaataccgaagaggccgca
cggcgtatcgccaaggctgccggcgtgccgttgcgcaccgtcagctatgccggtctcaag
gatcgtcaggccctgacccgccagtggttcagcgtacagttgcccggcaaggccgatccg
gacctgagcggcgcggaaaacgacaccctcaagatcctcaaaaccacccgtcataagcgc
aagttgcagcgtggcgcgcattcggccaatggctttaccttgcgcctgacccaactggcc
ggcgacaccgccgccatcgacgcacgtttgcagttgattgcccagcacggcatacccaat
tatttcggtgcccagcgtttcggccacaacggcggcaatgtggtggatgcccgcgaatgg
gcagcgcgcaaggccctgccggagcaacgcaatgtgcgctcgcggctgctgtccaccgcc
cgtagctacttgttcaacaaagtcttggcggcgcgtgtcgccgacggctcctggcagcgt
gcccaggtgggtgacctgctggcgtttaccgacagtcgcagttttttcccggccggggag
gctgaatgcagcgacccgcgcctggcgatcctggacctgcatccgaccggtccgcaatgg
ggcgaaggtgattcgccagcgacaggtcttacacatgaactggaacaatctgtcgccgcc
agcgaagccgacctgcgtgattggctggtcaatgcgggcatgagccaggaacgtcgcatt
ctgcgactgcccattggcgggttgacgtggcattatcccgggcctgacattctgcaattg
gaattcgtcctgccggccggatgcttcgccactgtcttggtgcgcgagcttgttgatctg
gtgccggtggggcagacggacagcccatgcgtattctga
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