Pseudomonas synxantha LBUM223: VO64_4484
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Entry
VO64_4484 CDS
T03769
Name
(GenBank) hydrolase, putative
Organism
pfb
Pseudomonas synxantha LBUM223
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Gene cluster
GFIT
Motif
Pfam:
Agarase_CBM
Glyco_hydro_42
Motif
Other DBs
NCBI-ProteinID:
AKA85030
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Position
5018724..5021021
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AA seq
765 aa
AA seq
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MIRTLPALFALLFAAPLMAAPAGQQTLFNFVRPADVVKVATQDASLPQYNAEQTPEGEVL
RRITFNPAAEPSLVLSPQTGVWDWSQSSAMSLRIQSAMSWALTLYIKVQSADGKTLVSRV
DLPAGPAQTLLVPLQANSPLSQGMKAGPPMPVTVEGQRVLLAGSAGEIDRSQVVSVTLSM
IKPNAAQSILLERFGVQDSEPVLKAAYSELVDAYGQSTRARWPEKVSSDDQLKALAAKEQ
QQLKTWLAERDKSSLDPYGGWNKGPAFDASGFFRTEKRDGRWYLVTPDGNPFYSLGVNTV
APDNSQTYVAGREWMFAALPKAGEPFDKYYGSGDNRSGNGAGEGRGFGSGRWYDFYGANL
QRTYGGEGLDQKRWVTHTLDRLQAWGFNTVGNWSDADLATADRVPYTLPLSIVGDYASIS
TGTDWWGGMPDPFDPRFAMATERAVAIAARDHRDDPWLIGFFADNELAWAGPGDDPKARY
ALAYGTLRMTTDVPAKRAFLKQLRDKYRNEEGLSKAWGIHLAGWELMEDPGFEPPMPNPE
HPEIEADFKYFQKTFADAYFKTLSDSLKWHAPNQLLLGGRFAVSTPEAVASCAQYCDVLS
FNMYTLKPQDGYDFAALRALDKPVLITEFNFGSADRGPFWGGVTQLAREEDRGAAYSAFL
KQAMAEPSIVGVHWFQYLDQPLTGRLLDGENGHFGLVGITDVPFQGFVDSVRKSNLAAVD
QLGKAAEKAKAAGAVREHEGGRSAQSGKGAGQGAGQAGGHSGNGH
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgattcgcacgctgcccgccctgtttgccttgctgttcgctgcgccgttgatggctgca
cctgccgggcaacaaacgctgttcaacttcgtcaggcctgccgatgtggtcaaggtggcg
acccaggacgccagcctgccgcaatacaacgccgaacaaacgcccgaaggcgaggtgctg
cgccgcatcaccttcaacccggcggccgagccgagcctggtgctcagcccgcaaaccggc
gtgtgggactggtcgcaatccagcgccatgagcctgcgtatccaaagcgccatgagctgg
gcgctgactctctacatcaaggtgcagagcgccgacggcaagaccctggtcagccgcgtc
gacctgccggccggcccggcccagaccctgctggtgccgctgcaagccaactcgccactg
agccagggcatgaaggccggcccgccgatgcctgtcaccgtggagggccagcgggtgttg
ctggccggtagtgccggggaaatcgaccgcagccaagtggtctcggtgaccctgtcgatg
atcaagcccaacgccgcccaaagcatcctgctggagcgcttcggcgtgcaggacagcgaa
ccggtgttgaaggccgcctacagcgaattggtcgacgcctatggtcagtcgacccgtgcg
cgctggccggaaaaggtcagcagcgatgaccagctcaaggctttggccgccaaggaacag
cagcagctcaagacctggctggccgagcgggacaaatcctccctggacccatatggcggc
tggaacaaaggcccggcattcgacgccagcggctttttccgcacggagaagcgcgatggc
cgctggtacctggtgacccccgacggaaatccgttttattccttgggcgtcaacaccgtg
gcgccggacaacagccagacctacgtggcggggcgtgaatggatgttcgcggcgctgccc
aaggccggcgaacctttcgacaagtattacggcagcggcgacaaccgcagcggcaacggt
gccggcgaaggacgtggctttggctcgggccgctggtacgatttctatggcgccaacctg
cagcgcacttatggcggtgaaggtctggaccagaagcgctgggttacccacaccctcgac
cgtctgcaagcctggggtttcaacaccgtaggcaactggagcgatgcggacctggccacg
gccgaccgcgtaccgtacaccctgccgctgtcgattgtgggtgactacgccagcatcagc
accggcactgactggtggggcggcatgcccgacccgttcgacccacgctttgccatggcc
accgaacgcgccgtggccatcgccgcgcgcgatcaccgcgatgacccgtggttgatcggc
ttctttgccgacaacgagctggcctgggccggccccggcgacgatccgaaagcccgctac
gccttggcctacggtaccttgcgcatgaccaccgatgtgccggccaagcgcgccttcctc
aagcaactgcgtgacaaataccgcaacgaagaaggcctgtccaaagcctggggcattcat
ttggcgggctgggagctgatggaagacccaggcttcgagccaccgatgcccaacccggag
cacccggaaatcgaagccgacttcaagtatttccagaaaacgttcgccgatgcctacttc
aagaccctctctgactcgctgaagtggcacgcgcccaaccaactgttgctgggcggccgt
tttgcagtgagcaccccggaagcggtggcgtcgtgcgcacagtattgcgacgtgttgagc
ttcaacatgtacaccctcaaaccccaggacggttacgacttcgccgccctgcgcgcattg
gacaaaccggtactgatcaccgaattcaactttggctccgccgaccgtggcccgttctgg
ggcggcgtgacgcaactggcccgcgaagaagaccgcggcgcggcttacagcgcctttctc
aagcaggccatggccgagccgtcgatagttggcgtgcactggttccagtacctcgaccag
ccgttgacagggcgtctgctggatggcgaaaacggccacttcggccttgtcggcatcacc
gatgtgccgttccagggcttcgtcgacagcgtccgtaaaagcaaccttgcggcagtcgac
caattgggcaaggcggccgaaaaagccaaggcggccggtgccgtgcgtgagcacgaaggt
ggccgatcagcccaatcaggcaaaggcgcggggcagggcgccggtcaggccggtgggcac
tctggaaatggtcattga
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