Pseudomonas synxantha LBUM223: VO64_4550
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Entry
VO64_4550 CDS
T03769
Name
(GenBank) Transcriptional regulator, IclR family
KO
K05818
IclR family transcriptional regulator, mhp operon transcriptional activator
Organism
pfb
Pseudomonas synxantha LBUM223
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfb03000
]
VO64_4550
Transcription factors [BR:
pfb03000
]
Prokaryotic type
Helix-turn-helix
IclR family
VO64_4550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_IclR
IclR_C
MarR
MarR_2
HTH_DeoR
TrmB
GAF
DprA_WH
HTH_27
HTH_9
Motif
Other DBs
NCBI-ProteinID:
AKA85096
UniProt:
A0AAU8TSL2
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All DBs
Position
5088194..5088952
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AA seq
252 aa
AA seq
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MDTGTVRSVERALAIVELLGEHQALGLEELHYLTRLPKATVSRMLLTLQEQGWVYRGLSD
RRYRLRARRLFGDTQQRFRRQVVESAAPWLVELSERTGLVVDLSCFDGERLEVMESAIPS
VLRKLYPNNCQIVGQYASLFHSAMGKACLTQLPLDEVQRLAGRDRVAADEQYHACEHTQH
QGFGQRTEGYWEYPVRLPFLIRAVALPVRAHGRLVGSMALHWPMHQAPVERVLNLHMASL
EETICEVQRALA
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atggacacaggcaccgtacgctcggttgagcgcgcactggcaatcgtcgagttgctgggt
gagcaccaggccctggggctggaggaactgcactacctcacgcgcctgcccaaggccacg
gtgtcgcgcatgttgctgaccttgcaggaacagggctgggtctatcgcggcctgagcgat
cggcgctaccgcctgcgtgcacgacgtttgtttggcgatacccagcaacgcttcaggcgc
caggtggtggaaagcgcggcgccgtggttggtggagctgagcgaacgcaccggcttggtg
gtggacttgtcctgtttcgacggcgagcgcctggaagtcatggagagcgcgattcccagt
gtgttgcgcaagctgtacccgaacaactgccagatcgtcggccagtacgccagcctgttc
cactcggcgatgggcaaggcgtgcctgacgcaactgccccttgatgaagtgcaacgcctg
gcgggccgcgaccgggtggccgccgatgagcaataccatgcgtgcgagcacacccagcac
caggggttcggccagcgtaccgagggctattgggaatacccggtgcgtctgccgttcctg
atccgggcggtggcgttgccggtgcgcgcccatggccggttggtgggcagcatggccttg
cattggccgatgcatcaggcgccggtggagcgggtgttgaacctgcatatggccagcctt
gaagaaacgatctgcgaagttcaacgggcattggcctga
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