Pseudomonas synxantha LBUM223: VO64_5003
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Entry
VO64_5003 CDS
T03769
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K18893
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
pfb
Pseudomonas synxantha LBUM223
Pathway
pfb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VO64_5003
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfb02000
]
VO64_5003
Transporters [BR:
pfb02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
VO64_5003
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_30
AAA_16
RsgA_GTPase
AAA_22
AAA_29
MMR_HSR1
AAA_18
AAA_21
AAA_5
AAA_28
P-loop_TraG
DUF87
AAA_10
AAA_33
Motif
Other DBs
NCBI-ProteinID:
AKA85549
UniProt:
A0AAU8TVS0
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All DBs
Position
complement(5584866..5586698)
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AA seq
610 aa
AA seq
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MLYRRFEQLIDIFRDAPSAAPPDKVLPFYLYYLRQVWPHFAALLVVGLIGALIEVALFSY
LSRIIDLAQGTPPADFFQIHSTELIWMAVVALLLRPIFGALHDLLVHQTISPGMTSLIRW
QNHSYVLKQSLNFFQNDFAGRIAQRIMQTGNSLRDSAVAAVDAIWHVAIYAISALVLFAE
ADWRLMIPLVSWIICYSLALRYFVPRVKERSVISSEARSKLMGRIVDGYTNITTLKLFAH
TQYEQQYAKEAIIEQTEKTQLASRVVTSMDIAITTMNGLLIVTTTGLALWLWTHSLISVG
AIALATGLVIRIVNMSGWIMWVVNGIFENIGMVQDGLKTIAQPLAVIDRDNAPRLSVPQG
EVRFEQVDFHYGKKSGIIGGLNLEIKAGEKIGLIGPSGAGKSTLVNLLLRLYDLQGGRIL
IDGQNIAEVAQESLREQIGMITQDTSLLHRSIRDNLLYGKPDATDEELWAAVHKARADEF
IPLLSDSEGRTGLDAHVGERGVKLSGGQRQRIAIARVLLKDAPILIMDEATSALDSEVEA
AIQESLETLMQGKTVIAIAHRLSTIARMDRLVVLEKGQIAESGSHSELLAHGGLYSRLWQ
HQTGGFVGID
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgctctatcgtcgttttgaacaactgatcgatattttccgcgacgcgcccagcgccgca
cctcccgataaagtcctgcccttctatctctactacctgcgccaggtgtggccgcatttc
gccgccctgctggtggtgggcctgattggggcgctgatcgaagtcgcgttgttcagctat
ttgagccgcatcatcgacctggcccagggcacgccgcccgccgatttcttccagatccac
agcaccgagctgatctggatggccgtggtcgccctgctcttgcgcccgattttcggcgcc
ctgcacgacctgctggtacatcagaccatcagccccggcatgaccagcctgattcgctgg
cagaaccacagctacgtgctcaagcagagcctgaatttcttccagaacgacttcgccggg
cgcattgcccagcgcatcatgcaaaccggtaactcactgcgcgattccgccgtggcggcg
gtggatgcgatctggcacgtggcgatctacgccatcagcgccctggtgctgttcgccgag
gccgactggcgcctgatgatcccgctggtgagctggatcatctgctacagcctggcactg
cgttacttcgtgccgcgtgtgaaggaacgctcggtgatttcctccgaagcacgctccaaa
ttgatgggccgcattgtcgacggctacaccaacatcaccaccttgaaactgttcgcccat
acccaatacgagcagcagtacgccaaggaagcaatcattgaacagaccgaaaaaacccag
ttggccagccgcgtggtgaccagcatggacatcgcgattaccaccatgaacggcctgctg
atcgtcaccaccaccggcctggcactgtggttgtggacccactcgctgatctcggtgggc
gcgattgccctggccaccggcctggtgatccgtatcgtcaacatgtccggctggatcatg
tgggtggtcaacggcatcttcgagaacatcggcatggtgcaggacggcctgaaaaccatt
gcccagccgctggccgtgatcgaccgcgacaacgccccacgcctgagcgtgccccagggt
gaagtgcgcttcgaacaggtagatttccactacggcaagaagagcggaatcattggtggc
ctgaacctggagatcaaggccggggagaagatcggcctgatcggcccgtccggagcgggc
aaatcgaccctggtcaacctgctgctgcgcctctacgacctgcagggcggacgcatcctg
atcgacggccagaatatcgccgaagtcgcccaggaaagcctgcgcgaacagatcggcatg
atcacccaggacacttcgctgctgcaccgctcgatccgcgacaacctgctgtacggcaag
cccgacgccacggacgaagagctctgggccgcggtgcacaaggcccgcgccgatgagttc
atcccactgctgtcggactccgaaggccgcaccgggctggacgcccatgtgggtgagcgc
ggggtgaaactctccggcggtcagcgccaacgtatcgccatcgcccgcgtgctgctcaag
gacgcgccgatcctgatcatggacgaagccacctcggcgctggactcggaagtggaagcg
gcgatccaggaaagcctggaaaccctgatgcagggcaagacggtgattgccatcgcgcac
cggttgtcgaccattgcgcgcatggatcgcctggtcgtgctggagaaaggccagatcgcc
gagagcggcagccattccgaattgctggcacatggcggactttattcgcggttatggcag
catcaaaccggagggtttgtcggtatagactga
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