Pseudomonas synxantha LBUM223: VO64_5331
Help
Entry
VO64_5331 CDS
T03769
Name
(GenBank) LysR family transcriptional regulator near succinyl-CoA:3-ketoacid-coenzyme A transferase
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
pfb
Pseudomonas synxantha LBUM223
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfb03000
]
VO64_5331
Transcription factors [BR:
pfb03000
]
Prokaryotic type
Helix-turn-helix
LysR family
VO64_5331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
HTH_20
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AKA85877
LinkDB
All DBs
Position
5955810..5956712
Genome browser
AA seq
300 aa
AA seq
DB search
MTVKQMRAFLAVAQSLSFAAACERLHLSQSALSLTIKGLEEGLGGRLFSRNTRNVALTPE
GESLLPLARRLIADWDNAEDELRQRFTLQRGRVTVAAMPSFAGNLLPPILKIFRARYPQV
NVTVHDLINEQVLEMVRDRQVELGVAFEPSEGSSLAFTPLYLDRFIAVVPGDSPLAQCAE
VDWKTLLEHPFITLQRPSTVRVMLEDHLGALQMKLPVALESHQLATVGKMVASGLGVSAV
PALCARQMEEAGAHCITLSGPVIERPIGVLTKPGHELSAAAQVLFDIFCDEARKGRFPTF
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttaaacagatgcgtgcctttctcgccgtggcccagagcctgagctttgccgcg
gcctgcgagcgcctgcacctttctcaatcggctctcagcttaacgatcaagggcctggaa
gaagggttgggtggacgcttgttcagccgtaacacacgcaatgtcgcgctaacccccgaa
ggtgaatcgctgttgcccctggcacgtcgattgattgctgactgggacaatgccgaggac
gaactgcgccagcgattcacgctgcaacgggggcgggtaacggtagcggcgatgccatcg
ttcgccggcaacctgttaccgccgatcctgaagatattccgcgcacgttacccccaggtg
aatgtgacggtgcatgacttgatcaacgagcaagtgctggagatggtgcgtgatcggcaa
gtcgagctgggcgtggcattcgagccgtccgaaggttcgtcattggccttcacgccgctg
tacctggaccgctttattgccgtggtgccgggtgattcgcccttggcgcaatgcgctgaa
gtcgattggaaaaccctgttggagcatccgttcattaccttgcagcggccatctacagtg
cgggtgatgctggaagatcacttgggtgctttgcaaatgaagctgcccgtggcgttggaa
agccatcaactggcgacggtgggcaagatggttgccagtggcttgggggtcagcgcagtg
ccggcgttatgtgcacggcaaatggaggaagcgggggcccattgcattactttgagcggc
ccggtgatcgagcggccgataggagtattgaccaagcccgggcatgaactatctgcagcg
gcccaagtattgtttgatatcttttgcgatgaggcgaggaagggcaggtttccaactttt
tga
DBGET
integrated database retrieval system
