Pseudomonas synxantha LBUM223: VO64_5387 Help Entry VO64_5387         CDS       T03769                                  Name (GenBank) ClpB protein   KO K11907   type VI secretion system protein VasG Organism pfb  Pseudomonas synxantha LBUM223 Pathway pfb02025   Biofilm formation - Pseudomonas aeruginosa pfb03070   Bacterial secretion system Brite KEGG Orthology (KO) [BR:pfb00001]  09130 Environmental Information Processing   09131 Membrane transport    03070 Bacterial secretion system     VO64_5387  09140 Cellular Processes   09145 Cellular community - prokaryotes    02025 Biofilm formation - Pseudomonas aeruginosa     VO64_5387  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02044 Secretion system [BR:pfb02044]     VO64_5387 Secretion system [BR:pfb02044]  Type VI secretion system   Imp/Vas secretion system core components    VO64_5387 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_2 AAA_lid_9 AAA AAA_5 ClpB_D2-small AAA_16 AAA_22 nSTAND3 AAA_7 AAA_25 ATPase_2 TniB IstB_IS21 AAA_14 Sigma54_activat WYL NACHT Zeta_toxin AAA_24 AAA_30 SLFN-g3_helicase DUF815 RuvB_N Hpr_kinase_C Tox-ODYAM1 Motif Other DBs NCBI-ProteinID:  AKA85933 UniProt:  A0AAU8TVU4 LinkDB All DBs Position 6020294..6022885 Genome browser AA seq 863 aa AA seqDB search MNLKTLFAKLNDLSRRATEDAAALCLNERHYDVEVEHVLLQLLAIDDCDMRPILHHYEVV TERLQAQLRTALTGFKVGNTRTPALSPQIARWIERAWVMASIEYGQERVRSGHLLLALLD DQELRRWVLASAAELEKVHPDDLRNRLVQLVEGTAEAIALDQSASPVTAGSGKTPALDQY TVNLTQSAREGRIDPVLGRDVEVRQMIDILTRRRQNNPILTGEAGVGKTAVVEGLALRVV QGEVPTVLREVAIHTLDLGLLQAGAGVKGEFEQRLKAVIEETKRSLHPIILFIDEAHTLI GSGGQAGQNDAANLLKPALARGELRTIAATTWAEYKKYFEKDAALARRFQVVKVEEPDEA QAVVMLRGLVEKMQAHHGVAILDEALIQAVRLSSRYISGRQLPDKAVSVLDTACARVALA QSTTPAALDDCVIQIEQITSERELLEQEARTGTPHQRRLDELEQALAGVQQHFDVLSGQW QRERALVDEVNQLSVQLRQGTETSFDALMRLKGQLAEVQRDNPLVHAQVDGAAVSEVIAG WTGVPLGTMLRDEIDTVQQLPQLLAERVLGQDHALEAISKRIKVSRAHMEDPDKPIGVFL LLGPSGVGKTETALALADTLYGGERNLITINMSEYQEAHSVATLKGSPPGYVGYGEGGVL TEAVRRKPFSVVLLDEVEKAHPDVLELFFQVFDKGMLDDAEGRSINFRNTLILLTSNVGT DHILRTCHQSDALPSPEQLIEELRPALQQAFKPAFLGRLQVVPFYPVQDAILERIVGLKL ARIQQRFERHYHVPLHITEAVPTTLASRCTEVDSGARNIDNILSGALMPELASCVLERMA QHLSIQRAEVDVGMDGGFVVSLS NT seq 2592 nt NT seq  +upstreamnt  +downstreamnt gtgaacctgaaaactctgtttgccaaactgaatgacctcagccgccgtgcgaccgaggat gctgctgcattgtgcttgaacgagcgccactacgacgtggaggttgaacatgtgctgctg caactgctggcgatcgatgattgcgacatgcggcctatccttcatcactacgaggtcgtg acagaacgcctgcaggctcaattacgcacagccctaacaggtttcaaggttggcaacact cgcacgccagcactgtcgccgcagattgcccggtggattgaacgggcgtgggtgatggcg tccattgagtacggtcaagagcgcgtacgcagcggccacctgctgcttgccttgcttgat gatcaggagcttaggcgctgggtgttggcttcggcagcggagttggagaaggttcatccc gatgatttgcgcaaccgacttgtccagttggtagaaggtacagcggaggcgattgccctg gatcaatcggcctcaccggtgacggccggatcgggcaaaacgccggctttggatcagtac acggtgaacctgacccaaagtgctcgggaagggcgtattgatccggtgttggggcgagat gtggaagtgcgccagatgatcgacatcctgacccgtcgccggcagaacaaccccatcctc acgggtgaggcgggtgtgggaaaaaccgccgttgtggaagggttggccctgcgcgttgtc cagggcgaggtgccgacggtgttgcgcgaggttgccattcacacgctcgatttagggctg ttgcaggcgggtgccggcgtgaagggcgagttcgagcaacggttgaaagctgtgatagag gaaaccaagcgcagcctgcatccgatcattctatttatcgatgaagcccataccttgatt ggctccggcggccaggctggacagaacgatgccgcgaatttgctcaagcccgcgttggcg aggggtgagttgcgcacaatcgccgcgactacctgggcggaatacaagaagtactttgag aaagacgcggcgttggctcgtcgcttccaggtggtcaaagtcgaagagccggacgaggcg caggcggtggtcatgctgcgggggcttgttgaaaaaatgcaggcgcaccacggcgtagcg atactggatgaggcactgatacaggccgtgcgtctatcgagccgttatatcagcggtcgg cagttgccagacaaggccgtgagcgtgctggatacggcctgcgcgcgcgtggcgctggct cagtccaccacgccagcggcactggacgattgtgtcattcaaattgagcagatcaccagc gagcgtgaattgttggagcaggaggcccgcaccgggacgccacaccagcgccggcttgac gaactggagcaggcgttggcgggcgtacaacaacactttgatgtgttgtcggggcagtgg cagcgcgaacgggctctggttgacgaagtgaatcaactgagtgtgcaactgcgccaggga accgagaccagtttcgatgccttgatgcgcttgaaggggcagttggctgaggtccagcgt gacaaccccttggtccacgctcaggtggatggtgctgccgtcagcgaggtgattgccggg tggaccggggttccactgggcacgatgctgcgcgatgagatcgatacggtgcaacagctc ccccagctcctcgccgagcgggtgttggggcaggaccacgcgctggaagcaatcagcaag cgtatcaaggtgtctcgggcgcatatggaagaccccgacaaaccgatcggtgtttttcta ttgctcgggccgagcggggtgggcaagaccgaaacggcattggcgctggcggataccttg tatggcggcgagcgcaacctgatcactatcaacatgtccgaataccaggaagcccacagc gttgccacactcaaaggctcgccgccagggtacgtcggctatggcgaaggcggcgtgttg accgaagcagtgcggcgcaaaccattcagcgtggtgctgctcgacgaggtggagaaggct caccccgatgtgttggagctgtttttccaggtgtttgacaaggggatgctggacgatgcc gaagggcgatccatcaacttccgcaataccctgattttgcttacctccaatgtcggcact gaccacattctgcgtacctgtcatcagtccgacgcgctacccagtcctgagcagctcatc gaagaactgcggccggcattacagcaggctttcaaacccgccttcctggggcgcttgcag gtggtgccgttctacccggtgcaggacgccattcttgaacgcatcgtcgggctcaaattg gcgcgcatccagcaacgcttcgagcgtcactaccacgtgcctttgcacatcactgaggct gtgccgacgacgctggcatcgcgttgtactgaggtggatagcggcgcccgcaacatcgac aacatcttgtccggcgccttgatgcccgaactggcgagctgtgtgctggagcgaatggcc caacatttgtccattcaacgtgcggaggtcgacgtgggtatggatggcgggtttgtggtg agccttagttag

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