Pseudomonas synxantha LBUM223: VO64_5540
Help
Entry
VO64_5540 CDS
T03769
Name
(GenBank) Transcriptional regulator of the arabinose operon in Shewanella, GntR family
Organism
pfb
Pseudomonas synxantha LBUM223
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
Sec3_CC
DUF6604
Motif
Other DBs
NCBI-ProteinID:
AKA86086
UniProt:
A0A0R2YDK5
LinkDB
All DBs
Position
complement(6209494..6210216)
Genome browser
AA seq
240 aa
AA seq
DB search
MDHQPPKPRKSQHAQIVQDLGMHIVSGRFKPEERLPMEATLCEEYQVSRSVLREATRVLS
AKGLVYSKPRVGAVVRPRLKWHLLDPDVLSWLMQSTPHSEFFNTLAGVRRILEPEIAAMA
ATTATDEDIATIEQAYQGMETAQTHEQLLQADLDFHRAIADATRNDLLAYMCNMLSLPLR
ESINITNRRPDIQGLSLPRHKAILTAIQNRDALGARHASLVQLDDTRVALDTVMNVLTPL
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggatcaccagccgcccaagccgcgcaagagccagcatgcccagatcgtccaggacttg
ggcatgcacatcgtttccggtcgcttcaagcctgaagaacggttgcccatggaagccacg
ctgtgcgaggaataccaggtcagccgctcggtattgcgcgaggcgacgcgggtgctgagc
gccaagggcctggtgtattccaagccgcgggtgggcgcggtggtgcggccgcgcttgaaa
tggcacctgctcgacccggacgtgctgtcctggttgatgcagtccacaccccacagcgag
ttcttcaacaccctggccggggtgcgtcgtatcctggagccggaaatcgccgccatggcc
gcgaccaccgccaccgatgaagacatcgccaccatcgaacaagcctaccagggcatggaa
accgcgcagacccacgaacagctgttgcaggccgacctggacttccaccgtgcgattgcc
gacgccactcgcaacgacctgctcgcctatatgtgcaacatgctttcactgccgttgcgc
gagtcgatcaacatcaccaaccgccgtccggatatccagggtttgagcctgccccggcac
aaggcgatccttaccgcgatccagaaccgcgacgccctgggcgcgcggcacgcctcgctg
gtgcaattggatgacacacgggtggcgctggatacggtgatgaatgtgctgacgccgttg
taa
DBGET
integrated database retrieval system
