Pseudomonas synxantha LBUM223: VO64_5709
Help
Entry
VO64_5709 CDS
T03769
Name
(GenBank) RND efflux system, inner membrane transporter CmeB
KO
K19594
gold/copper resistance efflux pump
Organism
pfb
Pseudomonas synxantha LBUM223
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfb02000
]
VO64_5709
01504 Antimicrobial resistance genes [BR:
pfb01504
]
VO64_5709
Transporters [BR:
pfb02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
VO64_5709
Antimicrobial resistance genes [BR:
pfb01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexPQ-OpmE [MD:
M00769
]
VO64_5709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Patched
CRIM1_C
Motif
Other DBs
NCBI-ProteinID:
AKA86255
UniProt:
A0AAU8TW87
LinkDB
All DBs
Position
6422678..6425854
Genome browser
AA seq
1058 aa
AA seq
DB search
MSFPRFFIDRPIFAIVLSVLMMIGGIVAFFHLPLSEYPAVTPPTVQVTASYPGANPQVIA
ETVAAPLEQVITGVEGMLYMTSQSATDGRMILTATFAQGTNADMAQIQVQNRVSRALPRL
PEEVQRLGVVTQKTSPDILMVVHLLSPDKRYDPLYISNYAYLQVRDELSRLPGINDVLVW
GAGEYSMRLWLDPDLIAARGLTAGDVIAAVREQNVQVAAGSVGQAPDSSAAFQVTVNTLG
RLTDEEQFGDIIIRTGDNGQVTRLRDVARIEMGADAYALRSLLDGEPAVALQIIQSPGAN
ALDVAQAVRDTMQRLQTNFPEGLVSRIAYDPTVFVRASLESVAITLMEAILLVVIVVVVF
LRNWRASLIPLMAVPVSIIGTFAVMHLMGFSLNTLSLFGLVLSIGIVVDDAIVVVENVER
HIENGEEPTQAARRAMGEVTGPIIAITSVLAAVFIPTAFLSGLQGEFYRQFALTIAISTI
LSAVNSLTLSPALAGLLLRPRGAAVVHDPRSLRGRAVRLLEVLGRPFQRAPQAYGSTVRK
VVGRRGVALVAYCGLLALTWFGFNAVPAGFVPMQDKYYLVGIAQLPNSASLDRTDAVVRQ
MSKIALDEPGVESVVAFPGLSVNGFVNVPNAAVMFVMLDPFKERTSPDMAAVAIAGRLQA
KFASIPDGFLGVFPPPPVPGLGVTGGFKLQVEDRGGVGLEALVQQTQVLMTKATESGQVA
GLMTSLDVNAPQLNVDIDRTQVKSQGVRLADVFESLQVYLGSLYVNDFNRFGRTYKVTAQ
ADADHRMQAEAIGRLQVRNAAGDMLPLSAFVTVTPGSGPDRVIHYNGYPSADISGGAMPG
VSSGQAVALMERLAQEVLPEGVTYEWTDLTYQQKLAGSSALFIFPLCVLLAYLILAAQYN
SWLLPLAVLLIVPMCLLSAIIGVWLVEGDNNVFVQIGLVVLVGLAAKNAILIVEFARSLE
AEGASPLEAVIHACQLRLRPILMTSLAFIAGVVPLVFASGAGAEMRHAMGVAVFAGMLGV
TLFGLFLTPVFYVVMRSLALRVERQGSSPKLQLEERAS
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcccacgctttttcattgatcggccgatcttcgccattgtcttgtcggtgttg
atgatgatcggcggtatcgtggccttctttcatctgccgctgagtgaataccccgcggtc
acgccgcccacggtgcaggtcaccgcgtcctatcccggggccaacccgcaggtgatcgcc
gagacggtggcggcgccattggaacaggtgatcaccggggtcgagggcatgttgtacatg
acctcgcagtcggccaccgacggccgcatgatcctgaccgcgaccttcgcccagggcacc
aacgccgacatggcgcagatccaggtgcagaaccgtgtgtcgcgggccttgccgcgcttg
cccgaggaggtgcagcgcctcggcgtggtcacgcaaaagacctcgccggacatcctcatg
gtggtccacctgctatcccccgataaacgttatgacccgctgtacatctccaactatgcc
tacctccaggtgcgtgacgagctgtcgcgcctgccggggatcaacgacgtgctggtatgg
ggcgcgggcgaatacagcatgcgcttgtggctcgacccggacctgatcgccgcccgtggc
ttgaccgccggcgatgtgattgccgcggtgcgcgagcagaacgtgcaagtggcggccggc
tccgtcggccaggcaccggattccagcgcggccttccaagtcacggtcaatactctcggg
cggctgacggacgaagagcaatttggcgacatcatcatccgcaccggcgataacggccag
gtcacgcgtctgcgtgatgtggcccgtatcgagatgggcgccgatgcctacgcgctgcgc
agcctgttggacggcgagccggcggtggccttgcagatcatccagagcccgggcgccaac
gccctcgatgtggcgcaggcagtgcgcgataccatgcagcgcctgcagaccaacttccct
gaagggctggtgtcgcggattgcctatgacccgacggtgtttgtgcgggcttcgctggag
tcagtcgcgatcaccctgatggaagcgatcctgctggtggtcatcgtggtggtggtgttc
ctgcgtaactggcgcgcgtcgctgatcccgttgatggccgtgccggtgtcgatcatcggc
accttcgcggtcatgcacctgatgggtttttccctgaataccttgtcgttgttcggcctg
gtgctgtcgatcggcattgtggtcgacgatgccatcgtggtggtcgagaacgtcgagcgg
catatcgagaacggcgaggagcccacgcaagctgcgcggcgtgcgatgggcgaggtcacc
ggccccatcattgcgattacctcggtgctggctgcggtgttcatccccacggcgttcctc
agtggattgcaaggtgagttctaccggcagtttgcgctgaccatcgcgatttcgacgatc
ctctcggcggtcaactcgttgaccctcagcccggcgttggccggcctgttgctgcgccca
cgaggtgccgccgtggtacatgacccgcgcagcctgcgcggtcgcgccgtgcgcttgctg
gaggtgctgggccggccgttccagcgtgcgccgcaggcgtatggcagcacggtgcgcaag
gttgtcggccgtcgcggcgtggcgctggtggcctattgcggattactcgcgctgacctgg
ttcggcttcaacgctgtgccggcgggttttgtgccgatgcaagacaaatactacctggtc
ggcattgcccaattgcccaactcggcgtcgctggatcgtaccgacgcggtggtgcggcaa
atgtcgaaaatcgccctggacgaaccgggagtggaaagcgtggtggcgttcccgggtctg
tcggtcaacggcttcgtcaacgtaccgaatgcggcggtgatgttcgtgatgctcgatccg
ttcaaggagcgaacctcgccggacatggccgcagtcgccatcgccgggcgcctgcaagcc
aagttcgcgagcattcccgacggtttcctcggcgtgttcccgccgccgccggtgcctggc
cttggcgtcaccggtggtttcaagctgcaggtcgaggaccgtggcggtgtagggcttgag
gcgttggtgcagcagacccaggtgctgatgaccaaagccaccgagtcggggcaggtcgcc
ggcttgatgaccagcctggacgtcaacgcgccgcagctgaatgtcgatatcgaccgcacc
caggtcaagagccagggtgtgcgcctggcggatgtattcgagtcactgcaggtctatctc
ggctcgctgtatgtcaacgacttcaatcgtttcggccgcacctacaaggtcaccgcccag
gccgatgcggaccatcgcatgcaggccgaggcgattggccgcctgcaagtgcgcaatgcg
gccggggacatgctgccgttgtcggcgtttgtcaccgtcaccccgggttccggccctgac
cgtgtgattcactacaacggctacccctcggcagatatctccggtggggcgatgccgggc
gtcagctcaggccaggccgtggcgctgatggagcgcctggcccaggaggtgctgcccgaa
ggtgtgacctatgagtggacggacttgacctaccagcaaaagctcgccgggtcgtcggcg
ctgtttattttcccgctgtgtgtgttgctcgcctatttgatcctcgcggcgcagtacaac
agctggctgctgccgctggcggtcttgctgatcgtgcccatgtgcctgctcagcgcgatc
atcggcgtgtggctggtggagggtgacaacaacgtgttcgtgcagatcgggctggtggta
ctggtcgggctggcggcgaagaacgccatcctgattgtcgagtttgcccgcagtctcgaa
gccgaaggcgccagcccgttggaggcggttatccacgcctgccaactgcgcttgcggccg
atcctgatgacctcactggcgtttatcgccggcgtggtgccgctggtatttgccagcggt
gccggggccgagatgcgccatgccatgggcgtcgcggtgtttgccggcatgctcggggta
acgctgttcggcctgttcctcaccccggtgttctacgtggtgatgcgcagcctggcgctg
cgcgtggagcgtcaggggtcgagtccgaagttgcagttggaggagcgtgcatcatga
DBGET
integrated database retrieval system
