Pseudomonas fluorescens A506: PflA506_0087
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Entry
PflA506_0087 CDS
T02114
Symbol
algB
Name
(GenBank) alginate biosynthesis transcriptional regulatory protein AlgB
KO
K11384
two-component system, NtrC family, response regulator AlgB
Organism
pfc
Pseudomonas fluorescens A506
Pathway
pfc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pfc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PflA506_0087 (algB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pfc02022
]
PflA506_0087 (algB)
Two-component system [BR:
pfc02022
]
NtrC family
KinB-AlgB (alginate production)
PflA506_0087 (algB)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA
Mg_chelatase
cREC_REC
AAA_2
VpsR
AAA_22
HTH_23
AAA_19
MCM
AAA_16
HTH_29
Xre-like-HTH
nSTAND3
IstB_IS21
DUF815
HTH_50
Motif
Other DBs
NCBI-ProteinID:
AFJ58417
LinkDB
All DBs
Position
complement(90034..91380)
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AA seq
448 aa
AA seq
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MDSAKELQGRILLVDDESAILRTFRYCLEDEGYTVATANSAAQADALMQRQVFDLCFLDL
RLGEDNGLDVLAQMRVQAPWMRVVIVTAHSAVDTAVDAIQAGAADYLVKPCSPDQLRLAT
AKQLEVRQLSARLEALEGEVRQPKDGLDSHSPAMMVVLETARQVAGTDANILILGESGTG
KGELARAIHGWSKRSKKSCVTINCPSLTAELMESELFGHSRGAFTGASESTLGRVNQADG
GTLFLDEIGDFPLTLQPKLLRFIQDKEYERVGDPVTRRADVRILAATNLNLEDMVRDGRF
REDLLYRLNVITLHLPPLRERSEDILTLADRFLARFVKEYARPARGFSDNAREALLNYRW
PGNIRELRNVVERASIICPQEKVEISHLGMAEQPANNAPRIGAALSLDELEKAHIGAVLA
TSDTLDQAARTLGIDASTLYRKRKQYNL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggattcagccaaggaacttcaaggccgcattcttttagtggatgacgaatccgcgatc
ctgcgcaccttccgctattgcctggaagatgagggctacaccgtcgccaccgcgaacagc
gccgcgcaggccgatgccctgatgcagcgtcaggtgttcgacctgtgcttcctcgacctg
cggctgggcgaggacaatggcctggacgtgctggcccagatgcgcgtgcaggctccgtgg
atgcgcgtggtgattgtgaccgcccattcggctgtggataccgccgtggacgccatccag
gctggcgccgccgactacctggtcaaaccttgcagcccagaccaattgcgcctggctacc
gccaagcaactggaagtgcgtcagctctcagcgcggttggaagcactggaaggcgaagtg
cgccagcccaaagacggcctcgactcccatagtccggccatgatggtggtgttggaaacc
gcgcggcaggtggccggaacggacgccaacatcttgatcctcggcgagtccggcaccggt
aaaggtgagttggcccgggcgatacacggctggagcaaacgctcgaagaagtcctgcgtg
accatcaactgcccctcactgaccgccgaactaatggaaagcgaactgttcggccacagc
cgcggcgcgttcaccggcgccagtgaaagcaccttgggccgagtgaatcaggcggacggc
ggcacgctgtttctcgacgagatcggcgatttccccctcacgttgcaacccaagttgctg
cggtttatccaggacaaagagtatgagcgcgtgggcgacccggtcactcgccgcgccgac
gtgcgcatcctcgcagccaccaacctgaacctggaagacatggtgcgcgatggccggttc
cgtgaagacttgctctaccgcctgaatgtcatcaccttgcacttgccgccgctgcgcgaa
cgcagtgaagacatcctgaccctggctgaccgcttccttgcccgcttcgtcaaggaatac
gcacgcccggcacgcggcttcagtgataatgcccgcgaagcgctactcaactatcgctgg
cccggcaacatccgcgaactgcgtaacgtggtggaacgcgccagcatcatctgccctcag
gaaaaggtggagatcagccacctggggatggccgagcaaccggccaacaatgcaccgcgt
atcggagcggctttgagcctggacgagctggaaaaagctcatatcggcgccgtacttgcg
accagcgacacgctggaccaagcggcccgcacactcggcatcgatgcgtcgacgctgtac
cgcaaacgcaagcagtacaacctttga
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