Pseudomonas fluorescens A506: PflA506_0258
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Entry
PflA506_0258 CDS
T02114
Name
(GenBank) S1 RNA binding domain protein
KO
K06959
protein Tex
Organism
pfc
Pseudomonas fluorescens A506
Brite
KEGG Orthology (KO) [BR:
pfc00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
PflA506_0258
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
S1_RRP5
YqgF
HHH_7
T2SSK
HHH_6
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AFJ57289
LinkDB
All DBs
Position
complement(301546..303870)
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AA seq
774 aa
AA seq
DB search
MDSINSRIAEELGVRPQQVEAAVALLDEGSTVPFIARYRKEVTGSLDDTQLRHLEERLRY
LRELDERRISILASIEEQGKLTPQLERDIKLADTKTRLEDLYLPYKQKRRTKGQIALEAG
LGDLADGLFNDPSLTPETEAARFIDAEKGVADVKAALEGAKYILMERFAENASLLEKLRT
YLKQEAILSARVIAGKEEEGAKFRDYFEHDEPLKSMPSHRALAIFRGRNEGILSSALKVG
DELPGTMHPCEGMIGQQFGIQNQNRPADKWLGEVVRWTWKVKLYTHLETDLLGELRDGAE
TEAINVFAHNLHDLLLAAPAGPRATLGLDPGLRTGCKVAVVDATGKLLDHATVYPHVPHN
KWDQTLAILAALCAKHAVDLIAIGNGTASRETDKLAAELIKKYPAMKMTKVMVSEAGASV
YSASELASKEFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQLKLARG
LDAVVEDCVNAVGVDVNTASVALLARISGLNATLAQNIVSHRDENGAFKTRAALKKVARL
GEKTFEQAAGFLRVMNGDNPLDASAVHPEAYPLVQRIAAETDRDIRSLIGDAAFLKRLDP
KKYTDETFGVPTITDILQELEKPGRDPRPEFKTAEFQDGVEDLKDLQPGMILEGVVTNVT
NFGAFVDIGVHQDGLVHISALSEKFIKDPREAVKAGDVVKVKVMEVDIPRKRVGLSMRMS
DTPGEKIDGARGARPGSAPRQSQNNAPRKETATAAPSNNAMASLFANAKQLKKR
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggacagcatcaacagccgcatcgccgaggaactcggtgtacgcccacaacaggtcgaa
gcggccgtcgctctactggatgaaggctccaccgtgcccttcatcgcccgttaccgaaaa
gaagtaaccggcagcctcgacgacacccaactgcgtcacctggaagagcgcctgcgctac
ctgcgagaactcgacgaacggcgtatcagcatcctcgccagcatcgaggaacagggcaag
ttgactcctcaactggaacgcgacatcaaactcgcggataccaagacccgcctcgaagac
ctttacctgccatacaaacagaaacgtcgtacaaagggccagatcgccctggaagccggc
ctgggtgatttggccgacggcctgttcaacgacccatcgctgaccccggaaaccgaagcc
gcgcgcttcatcgacgcggaaaaaggcgtcgccgacgtcaaggccgccctcgagggcgcc
aagtacatcctgatggagcgctttgccgaaaacgccagcctcctggaaaaactgcgtacc
tacctcaagcaagaagccatcctcagcgcccgcgttatcgccggcaaagaggaagaaggc
gccaagttccgcgactatttcgaacatgacgagccgctcaaaagcatgccgtcccaccgc
gccctggcgattttccgcggccgcaacgaaggcattctcagctccgcgttgaaagtcggt
gacgagttgccgggcaccatgcacccgtgcgaaggcatgattggtcaacaattcggcatc
cagaaccagaaccgcccggcggacaagtggctcggcgaagtggtgcgctggacctggaag
gtcaagctttacacccatctggaaaccgacctgctgggcgagctgcgcgacggcgccgaa
accgaggcgatcaacgtgttcgcccacaacctgcacgatctgctgttggccgcaccggcc
ggcccgcgtgccaccctgggcctcgacccgggcctgcgcactggttgcaaggtcgcggtg
gtcgacgccaccggcaagctgctggaccacgccaccgtgtacccacacgtaccgcacaac
aagtgggaccagaccctcgcgatcctggccgccctgtgcgccaagcatgcggtggacctg
atcgccatcggcaacggcaccgccagccgcgaaaccgacaagctggccgccgagctgatc
aaaaaatacccagccatgaagatgaccaaggtcatggtctccgaagcaggcgcttcggtg
tactcggcgtcggagctggcctccaaggaattcccggacctcgatgtgtcgatccgtggc
gcggtgtccatcgcccgtcgcctgcaagacccgctggccgaactggtgaagatcgaccct
aaatccatcggcgtcggccagtaccagcacgacgtgtcgcagctgaaactggcacgcggc
ctggatgcggtggtggaagactgcgtaaacgccgtgggcgtggatgtgaacaccgcgtcc
gtcgccctgctggcgcgaatctccggcctcaacgcgaccctggcgcagaacatcgtcagc
catcgcgacgaaaatggcgcgttcaaaacccgtgctgcactgaaaaaagtcgcacgcctg
ggtgaaaaaacttttgaacaggctgctggtttcttacgcgtaatgaacggtgacaacccg
ctggacgcctctgcggttcacccggaagcttacccattggtgcaacgcattgccgccgag
accgaccgcgatatccgttcgttgatcggtgatgccgcgttcctcaagcgcctggacccc
aagaagtacaccgacgagaccttcggtgtgccgaccatcaccgatatcctgcaagaactg
gagaaaccgggtcgcgacccgcgcccggagttcaagaccgccgagttccaggacggcgtc
gaagacctcaaggacctgcaaccgggcatgatcctcgaaggcgtggtgactaacgtgacc
aacttcggcgcattcgtggacatcggcgtgcatcaggacggcttggtgcacatctccgcg
ctttcggagaagttcatcaaggacccacgtgaggcagtcaaagctggtgacgtggtcaag
gtcaaggtcatggaagtcgacatcccgcgcaaacgcgtcggcctgtcgatgcgcatgagc
gacacccccggggagaaaatcgacggcgcacgtggtgctcgccccggttcggcgccgcgc
cagtcgcagaacaacgcgccgcgcaaggaaaccgcgactgccgcgcccagcaacaacgcc
atggcgtcgctgtttgccaacgctaaacagctgaagaagcgttga
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