Pseudomonas fluorescens A506: PflA506_0498
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Entry
PflA506_0498 CDS
T02114
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
pfc
Pseudomonas fluorescens A506
Pathway
pfc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pfc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PflA506_0498 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfc03019
]
PflA506_0498 (orn)
03009 Ribosome biogenesis [BR:
pfc03009
]
PflA506_0498 (orn)
Messenger RNA biogenesis [BR:
pfc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PflA506_0498 (orn)
Ribosome biogenesis [BR:
pfc03009
]
Eukaryotic type
Pre-60S particles
RNases
PflA506_0498 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AFJ57565
LinkDB
All DBs
Position
578086..578628
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AA seq
180 aa
AA seq
DB search
MQNPQNLIWIDLEMTGLNPDTDVIIEMATIVTDSNLNTLAEGPVIAIHHSDAVLATMDEW
NTRTHGNSGLTQRVRDSRISMAEAEAETIAFLEKWVPKGKSPICGNSICQDRRFLYTHMK
GLESYFHYRNLDVSTLKELAARWAPEVKDSFHKGSTHLALDDIRESIAELQHYRKHFIKA
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacccacagaacctgatttggatcgatctggaaatgaccggtctgaaccccgac
accgacgtcatcatcgagatggcgaccattgtcaccgacagcaacctcaacaccttggcc
gaaggcccggtgatcgccatccaccacagcgacgccgtactcgccaccatggacgagtgg
aacacccgcacccacggtaactccgggctgacccagcgcgtgcgcgacagccgcatcagc
atggccgaagccgaggccgaaaccattgccttcctggaaaaatgggtgcccaagggcaaa
tcgccgatctgcggcaacagcatctgccaggaccgtcgcttcctttatacgcacatgaag
gggctggaaagttacttccattaccgcaacctggacgtgtcgaccttgaaggaactggct
gcgcgttgggccccggaagtcaaagacagcttccataaaggcagcacgcacctggcgctg
gatgatattcgcgagtcgattgctgagttgcagcattaccgcaagcatttcatcaaggct
tga
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