Pseudomonas fluorescens A506: PflA506_0561
Help
Entry
PflA506_0561 CDS
T02114
Name
(GenBank) leucine rich repeat domain protein
Organism
pfc
Pseudomonas fluorescens A506
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF6543
NEL
LRR_8
LRR_4
Motif
Other DBs
NCBI-ProteinID:
AFJ57081
LinkDB
All DBs
Position
647694..654629
Genome browser
AA seq
2311 aa
AA seq
DB search
MPDATFNADLRGVHYDFLKQRVPNWFKEGTPQRQEELGKHEMDIPAWYLAATHTDKTTLA
AQHSRFRETLNSIEAHLGQIEDVLTFAEQPLKDAIKNEFNLELDVRNVFFVRKYGSKGAR
DDFYGAFVFEQQNDASLTYTYRGISLLEAALANFEADEEQPCACTDCQLITTFNPQNPNI
IATFAAVNAQAVAIAPPAFAKLCRTLDLGALYQAHIKAVVEPADASERQALQQLLEEHQR
QQLAVCIEIARLQLNGALSADAYRMLKQVVTGSDIPRLGGKPVTYAALKVFDSVLVGPLL
IGPDRQNTSRSEPLVVYIPGDPQQPVKEYASSSEFMADLRTRLHSASYRRFFSRFVPVRD
QGGFFARFNRLYQPANNGNGGADYPLRTPLARLPMQDWVVAGDLWQRSRQAHISKILSDA
RAVAVPTEDEDRKARLERLESFFDAAVSVFNLAAFVVPGLGPIMLAVGASQMCYEVFEGI
EAYEQGEPRQMWAHFASVALNVAFIAAGSKVLPAVKWQSAVDHLKPVTLPTGKQVLWNPD
LAPYASPLKPLPEAKPDALGLYEHEGQQLVPFDDSHYQVKQDPHTGQYRIQHPSRPNAYA
PELEHNHNGVWSHELEQPLTWDEPTLHKRLGLVGQSEPLRISGVETDALRQTMVDHEPLP
LLLDDTLKRLELHRQLSTFVEQIKSSDPLVYQKADPVLQFDMLQRRGLLPDNVPLKVIGP
TGDVLWETADAPTSVRKRVIVLTESTVAQGRLLRELLYTLQGVDPQLKEFPGSPDQSLDV
RCGQLRQYLGDAVQSLKGPLLEERYRALNPAPDADVQRVLDAFPSLPTLAAERLLQGAAA
NELEALRSSGRLPERLAEQAKWCAQQTRVARAYEGLHLDTQTGLDSHRLAVRTLETLPGW
HRGSRLELRQYSPEGTVLDAIGSPDFPHKRTLVLLESGEFQASMPGDFYSAIWEQLALDE
RQRLGLGSAAELKQAIQRSPLPRTELLTVLEANPLRKPEYDPMVRLLGGGPGFRLFRKIG
NALRTDRGRVRQLFPSFNEEQITAFIQSLGDDVTGGLARREEEFRALKKTLKVWWRAQGP
QAMNAYSVQTELVNQVVRCWRRETGASLKLHYGRGERFDLPPVSADFSHVQHLELSDISW
SSNAGKFLDNFRHLEGLKIFNGDVAEFPPVIGEMKNLTSLSITFSGLRLTPHSAHLLSRL
SALENLDLMHNPLGTLPDFSGMPNLTELNLRGTQIDRWPSGLTSLTGLKRVDLSNNRLQE
VPAQHLTPPADQLEAVVRTNNVTIVDGNPFAADYWQKFDQYWKNLTQNHPRLLRGALEDA
FDSANPRLRVMQKLYPNNSVQFSRGMIWALGEAAEAELASREQAFDTLLRQLEGWRFSGG
GERQRYVRVGQRSTEVAALSDRATAQQRILSCWRRETPQQLTHAGDPFGLELDLSGLNLP
SLPDLDADFSHVGSLKLSNMNLNTSPEGFLSGFRGVRWLDLSSNRLRELPPALGQMQGLT
RLSLQNNRIRLTPDSAAMLSSRTTLRALLLNSNPLGITPDFSQMSDLRSLGMGATGIDSW
PTGLGGQPSLDAVYLRANNISTLPDSLIAPPDEQLAQTLRVTRVTDLDLNPLSVETRQRI
VAYGNRLSAGERATNRLVASVMRVADRPVVLAATDAPFRRWSTGFSTQQVAQRRLQWSAL
QALPGAQGFFEVLRDLEVAPAGHADLQRRVWDVIDSITQNSAESEQLRKEMFEWAGRAAC
CDRAALTFSNLEILLMTHNARTLALDASQGAALLKLSRGLLRLEELEKIALQDIDQRRTA
IRKRDDLTSAQREVEFSRLEEVEIRLAYRHGLKDRLELPGQPQQPRFARLGNVSLEMLND
AYQRVISLDNSAQEFQAVLSRDFWKDYVANKYRARFEVQNEPHHQKMDTLRRDFEAGTLS
RAAYDAKAEELQAQFAIEEAQLIETLTRDEVAQALVPTATLEALVESTSVNLQLSQAQAI
EFNGKQYFVASMPDAGDGEYYVLWVQAVDNPLLLTSSGVIAKPDITGVWKRRGLRGGMVP
QGSDDEFVEASESMPVRPYTAGELSYMRREIHFTANPNPAGSYIRANNGKYPLRDYQGRP
IRIRSLEKQVTQDSGAHYTSAQIKPYIQFEGYEQVGARYEAQLQMRTFTEQDVKVPGEKA
LIGQSMVVANRRIAKGEIVGVYGGTVLPFGIFGPGEQTYTMKVGSQRVAHGNTLVEEPIH
LSGDNILSRINTHFEYDANGTPLRQALGGYNVETVAFDVEADMWLGVGPDAQIKRKPFLL
NAIFATEDIAAGTELRLDYQYTEDMIRGRFA
NT seq
6936 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatgcaaccttcaatgccgacctgcgcggcgtgcattacgactttctcaaacaa
cgcgtgccgaactggttcaaggaaggtacgccgcaacgccaggaagaactgggcaagcac
gagatggatattcctgcctggtacctggccgccacccacacggacaaaaccaccctggcg
gcgcagcattcacgctttcgtgaaacgcttaattcgattgaggcgcacctgggccagatt
gaagacgtcctgacattcgccgagcaaccgctgaaagatgcgatcaaaaacgagttcaat
ctggagctggatgtacgcaatgtgttcttcgtgcgcaagtatggctccaaaggcgctcgc
gatgacttctacggtgcctttgttttcgaacaacaaaatgacgcatcgctgacctacaca
taccgcggcatttcattgctggaagccgccctggccaatttcgaggccgatgaagaacag
ccctgcgcgtgcaccgattgccaactgatcaccaccttcaacccgcaaaaccccaacatc
attgcgaccttcgccgcggtcaatgcccaagctgtagcaatcgccccccccgcgttcgcc
aagctctgccgcactctggacttgggcgcgctttaccaggcgcatatcaaggcggtggtt
gaacctgcagacgccagcgagcgccaggcactgcagcagctactggaagaacaccagcgc
cagcagcttgcagtgtgcatcgagattgccaggctgcagttgaacggagcgctgagtgcc
gatgcctatcgaatgctcaagcaggtggtgaccggttctgatatccccaggcttggtggg
aaaccggtgacttatgccgcacttaaagtattcgatagcgtgttggtagggccgcttttg
atcgggcccgatcgtcaaaatacgagccgctccgagccgctggtggtgtacatccccggt
gacccccagcagcccgtcaaggaatatgcgtcaagtagcgagttcatggctgacttgcgc
acacgcctgcacagcgcatcgtatcgacgctttttcagccgctttgtgccggtgcgcgac
caaggcggttttttcgcccggttcaatcggttgtaccagcctgccaacaacggaaatggc
ggggcagactatccgctgcgcacaccgttagcgcggttgccgatgcaagactgggtcgtt
gccggtgacctgtggcagcgcagtcgccaagcacatatcagcaagattttgagtgatgca
cgtgccgtggccgtgcccactgaagatgaagaccgcaaggctcggctcgaacgtttggag
agctttttcgacgcggctgtcagcgtgttcaacctggccgcttttgtagtgccggggctg
gggccgatcatgctcgcggtgggtgcttcgcaaatgtgctacgaagtgttcgagggcatt
gaggcctacgaacagggcgagccgcgccagatgtgggcgcatttcgcttccgtggcgctg
aacgttgccttcatcgccgccggttccaaggtgttgcctgccgtcaaatggcagagtgcg
gtggatcatctcaaaccggtgacgctgccaacaggcaagcaggtgctgtggaaccctgat
cttgcgccctatgcatcgcccctcaaacctttgcccgaggccaagcccgatgcgttgggc
ctgtacgagcacgaaggccaacagttggtgccgttcgacgactcccattatcaggtcaag
caagacccacacacaggtcaataccgcatccagcatccgagccgtcccaatgcctatgcg
ccggaactggagcacaaccataacggggtctggagccatgaactggagcaaccgctgacg
tgggacgagcccacgctgcacaagcgcctgggcctcgtcggacagtccgaaccgctacgt
atcagcggcgtcgagaccgatgcgttgcgccagaccatggtcgatcatgagccgctgccg
ctcttgctggacgacaccctcaagcgcctcgaactgcaccggcaactcagcacctttgtc
gagcaaatcaaaagcagcgacccgctggtgtaccagaaagccgatcctgtgctgcaattt
gacatgctccagcgccgcggtttgctgcccgataacgtaccgcttaaagtcattggcccc
accggcgatgtgctgtgggaaaccgccgatgcgccaacttcagtgcgcaagcgtgtgata
gtgctgaccgaaagcaccgtggctcagggccgcttgctcagggagttgctgtacaccttg
cagggtgtcgacccgcagctcaaggagttcccgggtagccccgatcaatccctggacgtt
cgctgcggccaactgcgccagtacctcggcgatgccgtgcagagtctcaaggggccgttg
ctggaagaacgctaccgagcgctgaaccccgcgcccgatgcggatgtacaacgtgtgctg
gacgcattcccgtccttgccgaccctggcggccgagcggctgttgcaaggggctgcggca
aacgaactggaggccttgcgcagcagcggtcgcttgcctgagcgattggccgagcaagcg
aaatggtgtgcccagcaaacccgtgtggcgcgtgcctacgagggcctgcaccttgacact
cagaccggactcgacagccatcgcttggccgtgcgcaccctggaaacgttgccaggatgg
caccgaggttcgcggctggagttacgccagtattcccctgagggcacggtgctcgatgcc
atcggctcacccgatttcccgcacaagcgaaccttggtgctgctggagagcggcgaattc
caggcttccatgcccggcgatttctatagtgccatctgggagcaactggcgctcgacgag
cgtcagcgcctgggcctgggcagcgccgctgagctcaagcaggcgattcagcgcagccct
ttaccacgcacggagctgcttacggtgctggaggccaacccactgcgcaaaccggagtat
gacccgatggttcgtctgttgggtggcgggccggggtttcgtctgttcaggaaaattggc
aacgcgttgcgcacggacagagggcgtgtacggcagttgtttcccagcttcaacgaggag
caaatcaccgcgtttatccaatccttgggtgatgacgtgactgggggactagcgcggcgg
gaggaagagtttcgggcactgaaaaaaaccttgaaggtgtggtggcgcgcccaagggccg
caagccatgaatgcctacagcgttcagacagagctggtcaatcaagtcgtgcgttgctgg
cggcgggaaaccggggcgtcactgaagctgcattacggcaggggggaacggtttgatttg
ccgccagtgagtgcagatttcagtcatgtgcaacaccttgagctgtccgacatcagttgg
tcgagcaacgcgggcaagtttctcgacaacttcaggcatctggagggtttgaagatcttc
aatggcgacgttgccgaatttccgcctgtgatcggggaaatgaaaaatctgacttcgttg
agcatcaccttcagcgggcttcgattgacaccgcacagtgcgcacttgttaagccggctc
agcgcgcttgaaaacctggacctgatgcataacccgttaggtacattgcccgacttcagt
ggtatgccaaacctcacggagttgaacttgcgcggtacgcagattgaccggtggccttct
ggattaaccagcctgaccggattgaagcgtgtcgacctgtcgaataaccgactgcaggag
gtccctgcgcaacacttgacgccgccggcggatcagctcgaagcggtcgtgcgcacgaat
aacgtcaccatcgtggatggcaacccctttgcggccgactattggcagaagttcgaccag
tattggaagaacctgacgcagaaccatccgcggctcctgcgaggcgcccttgaggacgcc
ttcgacagcgcgaatccaaggcttcgggtcatgcagaaactatacccgaacaacagcgtg
cagttttccagggggatgatttgggcgttgggcgaggccgccgaggcagagctggcgtcg
cgtgagcaggcatttgacacgctgctgcgtcagttggagggctggcggttctccggcggc
ggtgagcgccagcgctatgtgcgggttgggcaacgttccaccgaggtggcggcactgagt
gatcgcgcaacggcccagcaacgtatcttgagttgctggcgcagggaaaccccgcagcaa
ctcacccacgcgggtgaccccttcggtctggagctggacctcagtggcctgaacctgccg
agcctgcctgatctggatgcggatttcagccatgtcggttcactcaaattgagcaacatg
aacctcaatacgtcgcctgaaggttttctctctggctttcgaggcgtgcgctggctggac
ctgtcgagtaaccggttgcgcgaattgccaccggcgctggggcagatgcagggcttgacc
cggctgtccctgcaaaacaaccggatacgcctgacccccgattctgcagcgatgctgtcg
tcacgcaccacgctcagggcgttgctgctcaattcaaacccactgggtatcacgccggat
ttcagtcaaatgtcggatctgcgttcattgggcatgggggcaaccggcattgatagctgg
ccgacgggcttgggtggccaaccaagcctggatgcggtgtacctcagagctaacaatatt
tccacattgcccgattcgctgatagccccgccggacgagcaactggcacagaccctgcgc
gtcacccgtgtgaccgatctggatttgaacccgttgtcggtcgagacgcgacaacgcata
gtcgcttacggcaaccggctaagtgcgggagaacgagccactaacaggctggtcgccagc
gtcatgcgggtggctgatcgtcctgtggtgttggctgccactgatgctccgttccggcgc
tggtccaccgggttctccacgcaacaggttgcgcagcgcagacttcaatggtccgccctg
caggccctgcccggtgcgcaaggtttcttcgaagtgctgcgtgacctggaagtcgcacca
gcaggccatgcagacttgcagcggcgcgtgtgggacgtgatcgatagcatcacgcaaaac
agcgccgagtccgagcagttgcgcaaggaaatgtttgaatgggcgggccgggcggcctgt
tgtgatcgcgcggccctgaccttcagcaaccttgagatcctgctgatgacccacaacgcc
aggaccctcgcactggacgcgtcccagggagcggcgctgctgaaactgtccagggggctg
ttgcgcctggaggagctggagaagatcgcactgcaagatatcgatcagcgtagaactgcg
atccgcaagcgcgacgacttgacctccgctcagcgcgaggtggagttcagccgcttggaa
gaggtggagattcggctggcgtatcgtcatggcctgaaggatcgccttgagttgccgggc
cagccgcaacagccacggttcgcccgtctgggtaatgtctccttggagatgcttaatgat
gcctatcagcgagtcatcagcctggataactccgcacaggagtttcaggccgtgctttca
agggacttctggaaagattatgtggcgaacaaataccgcgcacggtttgaagtacagaac
gagccccatcaccaaaaaatggatactttgcggcgtgatttcgaggctgggacgttatcg
cgcgcagcctacgatgccaaggccgaggagttgcaggcacagtttgcgattgaagaagcg
cagttgattgaaaccttgacccgcgatgaagtggcgcaggcgttggtacccacggcaacg
cttgaggcgctggtggaaagcacctccgtgaacctgcaactttcccaggcgcaagccatt
gaattcaatggcaagcaatattttgtcgcgagcatgcccgacgcgggcgatggtgagtac
tacgtgctgtgggtacaggcggtggacaatccgttgctgttgaccagcagcggtgtgatt
gccaagcctgatatcaccggggtctggaagcgccggggcctgaggggcgggatggtaccg
caaggttcggacgatgaatttgtggaggcctcggagtccatgccggtgcggccatacacg
gcgggcgaactcagctatatgcgccgtgaaatccatttcacggccaatcccaatccggcc
ggcagctacatccgtgccaacaacggcaagtatccgctgagggattatcagggacggcct
attcgaatcaggtcgctggagaagcaggtgacccaggactcgggcgcccactacacctcg
gcgcagatcaagccttacatccagttcgagggatatgaacaggtcggcgcgcgctatgaa
gcgcaactgcaaatgcgcacgttcaccgaacaagacgtgaaagtgccgggcgagaaagcg
ttgatcggccagtcgatggtggtggccaaccgccgaatcgccaaaggcgaaatcgtcggt
gtgtacggcggtaccgtgctgccgttcggtatcttcgggcctggcgaacagacctatacc
atgaaggtgggcagccagagggttgcccacgggaacacgctggtggaagaaccgattcac
ttgtcgggtgacaacatcctgtcgcgaatcaacacccactttgagtacgacgccaacggc
acacccctgcgccaggcgttgggaggctacaacgttgagaccgtggctttcgacgtcgag
gccgacatgtggctgggcgtggggcctgacgcgcagatcaagcgcaagccatttttactc
aatgccattttcgctaccgaagatatcgccgctggcaccgagttgcgtttggactaccag
tacaccgaagacatgataagaggccgatttgcctga
DBGET
integrated database retrieval system
