Pseudomonas fluorescens A506: PflA506_0928
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Entry
PflA506_0928 CDS
T02114
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pfc
Pseudomonas fluorescens A506
Pathway
pfc00470
D-Amino acid metabolism
pfc00550
Peptidoglycan biosynthesis
pfc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pfc00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PflA506_0928 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PflA506_0928 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pfc01011
]
PflA506_0928 (murD)
Enzymes [BR:
pfc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
PflA506_0928 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pfc01011
]
Precursor biosynthesis
Amino acid ligase
PflA506_0928 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
AFJ56075
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Position
1049337..1050683
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AA seq
448 aa
AA seq
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MSLIASDHFRIVVGLGKSGMSLVRFLANRGTSFAVADTRENPPELVTLRRDYPHVEVRCG
ELDVEFLCRADELYVSPGLALATPALQAAAARGVKLSGDIDLFARNAKAPIVAISGSNAK
STVTTLVGEMAAAAGKRVAVGGNLGVPALDLLSDDVELYVMELSSFQLETTHDLGAEVAT
VLNVSEDHMDRYSGLPAYHLAKHRIFRGAKQFVVNRQDALSRPLIGEGMPCWTFGLGKPD
FKGFGIREENGEKYLAFEFQNLMPVRELKIRGAHNQSNALAALALGHAVGLPFDAMLASL
RTFAGLEHRCQWVRDLNDVSYYNDSKATNVGAALAAIEGLGADIDGKLVLIAGGDGKGAD
FKDLKTPVAAHCRAVVLMGRDSDLIAAALGDAVPQVRAASLDDAIAQCKALAQPGDAVLL
SPACASFDMFKNYEERGQLFARAVEALA
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgtccctgatcgcttcagaccacttccgcatcgttgtcggcctcggcaagagcggcatg
tccctggttcgcttcctggcgaaccggggcacgtcgtttgccgtggccgatacgcgggaa
aatccaccggagctggtcacgctgcgccgtgactacccgcacgtggaagtgcgctgtggc
gagctggatgtcgagtttctgtgccgtgccgacgagctctacgtgagcccgggcctggcc
ctggcgacaccggccctgcaagcggctgcggcccgtggtgtgaagctgtctggcgatatc
gacctgttcgcacgcaacgcgaaggcgccgatcgtggccatcagcggttccaacgccaaa
agcaccgtcaccactctggtcggcgagatggcggctgcggcgggcaagcgtgtggccgtt
ggcggcaatcttggcgtgccggcactggatttgctcagcgacgacgtcgagttgtacgtg
atggagttgtcgagcttccagctggaaaccacccacgacctgggcgctgaagtggcgacg
gtattgaacgtcagcgaagaccatatggaccgctacagcggcctgccggcttatcacttg
gccaagcaccggatcttccgtggcgccaagcaatttgtcgtcaaccgccaggatgccctg
agccgtccgctgataggcgagggcatgccctgctggaccttcggcctgggcaaaccggac
ttcaaaggcttcggcattcgtgaagagaacggcgagaagtacctggcgttcgaattccag
aacctgatgccggtacgcgaactgaaaatccgtggcgcacacaaccagtccaatgccctg
gcggccttggcgctcggtcacgcggttggcctgccgttcgacgccatgctcgcgagcctg
cgcacctttgccgggcttgagcatcgctgccagtgggtgcgcgacctcaatgacgtcagc
tattacaacgactccaaagccaccaatgtcggtgcagccctggcggccatcgaaggcctg
ggggccgatatcgacggcaagctggtgctgatcgccggtggtgatggcaagggtgccgac
ttcaaggacctcaaaactccagtggccgcccattgccgcgccgtggtgctgatgggccgc
gattcggacctgatcgccgccgccctcggtgacgctgtaccgcaagtacgcgcagcttcc
ctggacgacgccattgcccagtgcaaagccctggcccagcctggcgatgcggtgttgctg
tcgcccgcgtgcgccagcttcgacatgttcaagaactatgaagagcgcggccaactgttc
gcccgcgccgtggaggctttggcatga
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