Pseudomonas fluorescens A506: PflA506_1043
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Entry
PflA506_1043 CDS
T02114
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pfc
Pseudomonas fluorescens A506
Pathway
pfc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pfc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PflA506_1043 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfc03019
]
PflA506_1043 (rnc)
03009 Ribosome biogenesis [BR:
pfc03009
]
PflA506_1043 (rnc)
03036 Chromosome and associated proteins [BR:
pfc03036
]
PflA506_1043 (rnc)
Enzymes [BR:
pfc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
PflA506_1043 (rnc)
Messenger RNA biogenesis [BR:
pfc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PflA506_1043 (rnc)
Ribosome biogenesis [BR:
pfc03009
]
Eukaryotic type
90S particles
RNase
PflA506_1043 (rnc)
Prokaryotic type
rRNA processing factors
PflA506_1043 (rnc)
Chromosome and associated proteins [BR:
pfc03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
PflA506_1043 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
AFJ57189
LinkDB
All DBs
Position
1178724..1179413
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AA seq
229 aa
AA seq
DB search
MTVSLSRLERQLGYTFKDQELMVLALTHRSFAGRNNERLEFLGDAILNFAAGEALFERFP
QAREGQLSRLRARLVKGETLAVLARGFGLGEYLRLGSGELKSGGFRRESILADALEALIG
AIYLDAGMETAKERVVAWLASEIESLTLVDTNKDPKTRLQEYLQSRGCELPRYEVVDIQG
EPHCRVFFVECEITLLNEKSRGQGVSRRIAEQVAAAAALIALGVENGHD
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgtttctctaagtcgtctcgagcgtcagctcggctacaccttcaaggaccaggaa
ttgatggtccttgccctcacacaccgcagctttgcagggcgcaataacgagcgcctggaa
ttcctcggtgacgctatcctcaatttcgccgccggcgaggcgctgttcgagcgcttcccc
caagcgcgagaaggccagctgtcgcgcctgcgcgcacgccttgtgaaaggcgagaccctg
gctgtgctggcccgaggctttggcctgggcgagtacctgcggctgggttccggtgagttg
aaaagcggcggtttccgtcgcgagtcaatcctggctgatgccctggaagccttgatcggt
gcgatctacctcgatgccgggatggagacggccaaggaacgcgttgtcgcctggctggcc
tcggaaatcgaaagcctgacgctggtagacaccaacaaggatcccaagacccgcctgcaa
gagtacctgcagtcccgcggttgcgaactgccacgctacgaagtggtggatatccagggc
gagccccattgccgggtgttcttcgtggaatgtgaaatcactttattgaacgaaaaaagc
cgaggtcagggtgtgagccgtcgtattgccgaacaggtagcggccgctgcagcactgatt
gccctgggcgtggagaatggccatgactga
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