Pseudomonas fluorescens A506: PflA506_1100
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Entry
PflA506_1100 CDS
T02114
Name
(GenBank) sigma-54 dependent DNA-binding response regulator
Organism
pfc
Pseudomonas fluorescens A506
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA
AAA_16
AAA_19
TIP49
IstB_IS21
AAA_22
MCM
HTH_24
HTH_30
AAA_30
nSTAND3
APS_kinase
OKR_DC_1_N
DUF3410
AAA_18
TP_0454_N
Motif
Other DBs
NCBI-ProteinID:
AFJ57419
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Position
1263958..1265355
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AA seq
465 aa
AA seq
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MTHNVLVVDDEPKLCDLLTQALSQNGIQVFSAGNGLHALKVLGEEDIDLVISDWRMPGMD
GPALLAEIKVRYPTLPVIVMTAYSTVKNAVQSMRNGAYDYIAKPFDIDELDITVAKALQF
RDIMRDNARMRAELDEHAQFDSLVGDSPAFRQVLQAVDSVRDSNATILLTGESGTGKEMV
ARAIHKHGSRADQPFVAVNCAAIPEGLLESEMFGHRKGAFTGAVADRVGRFMQADKGTLF
LDEVGDMPLALQAKILRALQERVIEPVGDPRERKVDVRVIAATNKNLLDAVAAKEFREDL
YYRLNVFPIPLPSLRERVEDIAPLARHFAHTLSATTGKRITGFSPEALQAMAAYHWPGNI
RELQNCVERATIVAASSVIEDIDLPGYLFASKPSEGDVTAILSDGPGVPRDLDAALAEVE
KAYILAALQESNGVQAAAAQRIGISERSFWYRLKKLGIQVDKIVR
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgacgcataacgtattggtggtcgacgacgagcccaagctctgtgatctgctgacccag
gccttgagccagaacggcatccaggtgttcagcgcgggcaatggcctgcatgcgctcaag
gtgctgggggaggaggacatcgacctggtcatcagcgactggcgcatgccgggcatggac
gggccggcgttgctggccgaaatcaaggtgcgttatccgaccttgccggtgatcgtgatg
acggcctacagcacggtgaaaaacgccgtgcagtcgatgcgtaacggtgcctatgactac
attgccaagccgttcgacatcgacgagctggacatcaccgtggccaaggccctgcagttt
cgcgacatcatgcgcgacaacgcgcgcatgcgcgccgagctggacgagcatgcgcagttc
gacagcctggtgggcgatagcccggcgtttcgccaagtgctccaggcggtcgattcggtg
cgcgacagcaacgctactatcctgctgaccggcgaaagcggcactggcaaggaaatggtc
gcccgcgccatccacaagcatggcagccgtgccgaccaacccttcgtggcggtcaattgc
gcggccatccctgaaggcttgctggaaagcgagatgtttggccatcgcaaaggcgcgttc
accggcgccgtggctgaccgggtagggcgcttcatgcaggccgacaagggcacgctgttt
ctggatgaggtaggtgatatgcccttggcgctgcaggccaagatcctgcgcgccttgcag
gagcgggttatcgagccggtaggcgacccccgcgagcgcaaggtggatgtacgagtaatt
gccgccaccaacaagaacctgctggatgcggtggcggccaaggagtttcgcgaagacctg
tattaccgcctgaatgtcttcccgattccgttgccgtcgttgcgcgaacgcgtggaagac
atcgcgcctctggcgcgccactttgcccacaccctgagcgccaccaccggcaaacgcatc
accggtttcagccccgaggcgttgcaggccatggcggcgtatcactggccgggcaatatt
cgcgagctgcaaaactgcgtggagcgcgcaaccatcgtcgcggcttcatcggtgatcgag
gatattgatttgccggggtatctgtttgcttccaaaccaagcgagggcgatgtgaccgcg
atcctcagcgacgggccgggcgtgccgcgggatctggatgcggcgctggccgaggtggag
aaagcctacattcttgcagcgttgcaggagagcaatggggtgcaggccgcggcggcgcag
cggatcgggatttccgagcgcagcttctggtatcgcctgaaaaagctggggattcaggta
gacaagatcgtgcgctga
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