Pseudomonas fluorescens A506: PflA506_1387
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Entry
PflA506_1387 CDS
T02114
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pfc
Pseudomonas fluorescens A506
Pathway
pfc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pfc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PflA506_1387 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfc03400
]
PflA506_1387 (ung)
Enzymes [BR:
pfc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PflA506_1387 (ung)
DNA repair and recombination proteins [BR:
pfc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PflA506_1387 (ung)
Prokaryotic type
PflA506_1387 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AFJ55951
LinkDB
All DBs
Position
1556905..1557597
Genome browser
AA seq
230 aa
AA seq
DB search
MTDGDRIKLEPSWKHALREEFEKPYMGQLREFLRQEHAAGKEIYPPGPLIFNALNSTPLD
KVKVVILGQDPYHGPGQAHGLCFSVQPGVPAPPSLVNIYKELKRDLNIDIPNHGYLQSWA
DQGVLMLNTTMTVERANANAHAGKGWQFFTDRIIEVVSEHQPHLVFLLWGAHAQSKQKLI
DATKHLVLTSVHPSPLSAYRGFLGCGHFSRANKFLEQNGEAPIEWRLPPV
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatggcgaccgtatcaaactcgaacccagctggaaacacgctctgcgtgaagag
ttcgagaagccttacatggggcaattgcgcgagtttctgcgccaggaacatgccgcaggc
aaagagatctacccgcccggcccattgattttcaacgcactcaattcaacaccgctggac
aaggtcaaggtcgtgatcctcggccaggacccctaccacggccctggccaggcccatggc
ctgtgtttctcggtgcaaccgggcgtgccggcgccgccgtcgctggtcaatatctataaa
gagctcaagcgcgacctgaacatcgacatccccaaccacggctacctgcaaagctgggcc
gaccagggcgtgctgatgctcaacaccaccatgaccgtggagcgcgccaacgccaacgcc
catgcgggcaagggttggcagttctttaccgatcggattatcgaggtagtcagcgagcat
cagccgcacctggtgttcctgctgtggggcgcccatgctcaaagcaagcagaagctcatc
gacgccaccaagcatctggtgctgacctcggtgcatccttcgccgttgtcggcgtatcgc
gggtttctgggctgcgggcatttcagccgggccaacaagtttctcgagcagaatggcgag
gcccccatcgagtggcgtttgccacccgtctga
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integrated database retrieval system
