Pseudomonas fluorescens A506: PflA506_1567
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Entry
PflA506_1567 CDS
T02114
Symbol
fadB
Name
(GenBank) fatty oxidation complex, alpha subunit
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pfc
Pseudomonas fluorescens A506
Pathway
pfc00071
Fatty acid degradation
pfc00280
Valine, leucine and isoleucine degradation
pfc00310
Lysine degradation
pfc00362
Benzoate degradation
pfc00380
Tryptophan metabolism
pfc00410
beta-Alanine metabolism
pfc00640
Propanoate metabolism
pfc00650
Butanoate metabolism
pfc00907
Pinene, camphor and geraniol degradation
pfc00930
Caprolactam degradation
pfc01100
Metabolic pathways
pfc01110
Biosynthesis of secondary metabolites
pfc01120
Microbial metabolism in diverse environments
pfc01200
Carbon metabolism
pfc01212
Fatty acid metabolism
Module
pfc_M00087
beta-Oxidation
pfc_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pfc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
PflA506_1567 (fadB)
00650 Butanoate metabolism
PflA506_1567 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
PflA506_1567 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PflA506_1567 (fadB)
00310 Lysine degradation
PflA506_1567 (fadB)
00380 Tryptophan metabolism
PflA506_1567 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PflA506_1567 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PflA506_1567 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PflA506_1567 (fadB)
00930 Caprolactam degradation
PflA506_1567 (fadB)
Enzymes [BR:
pfc01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PflA506_1567 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
PflA506_1567 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
PflA506_1567 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
PflA506_1567 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AFJ59189
LinkDB
All DBs
Position
1729408..1731555
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADASVKGVIVSS
GKDVFIVGADITEFVDNFKLPDAELVAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADFRVMSATAKIGLPEVKLGIYPGFGGTVRLPRLIGADNAIEWIAAGKENKAEDAL
KVGAVDAVVAPDKLAEAALSLIKGAISGEFDYKAKRQPKLEKLKLNAIEQMMSFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEAQVK
DDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEAKRLGQKNGKGFYAYEADKKGKQ
KKVADPSVHEVLAPVIYEQREVSDEDIINWMMIALCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADKYADLGPLYHPTAKLREMAKNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaactc
aaattcgacctcaagggtgagtccgtcaacaagttcaaccgtctaaccctgaacgaactg
cgtcaggccgtagacaccatcaaagcagatgcttcggtcaagggcgtgatcgtctccagc
ggcaaggacgtgtttatcgtcggcgctgacatcaccgaattcgtcgacaacttcaagctg
cccgatgccgagctggtggctggcaacctcgaagccaacaagatcttcagcgatttcgaa
gacctcaacgtgccgactgttgctgccatcaacggcatcgcgttgggcggcggcctggaa
atgtgcctggcggcagacttccgtgtcatgtccgcgacggccaagatcggcctgccggaa
gtcaagctgggcatctacccaggctttggcggtacggtgcgcctgccgcgcctgatcggt
gccgacaacgcgatcgaatggatcgccgccggtaaggaaaacaaggctgaagacgcgctg
aaagtcggtgccgtcgacgcagtagtggctccggacaaactggccgaagccgcgctgagc
ctgatcaaaggcgccatcagcggcgaatttgactacaaggccaagcgtcagccgaagctg
gaaaaactcaagctcaacgccatcgaacagatgatgtcgttcgaaaccgccaaaggtttc
gtggcaggccaggccggcccgaactacccggcgccggttgaagcgatcaagaccatccag
aaggccgcgaactttggtcgcgacaaagccctggaagtggaagcggcaggcttcgtcaaa
ctggcgaaaacctcggcggcccagagcctgatcggcctgttcctgaacgatcaggaactg
aagaaaaaggccaaggcctacgacgaaatcgccaaggacgtgaaacaggccgccgtactc
ggcgccggtatcatgggcggcggtatcgcctatcagtcggcgtccaaaggcacgccgatc
ctgatgaaagacatcaacgagcacggtatcgaacagggcctggccgaagccgccaagctg
ctggtgggccgcgttgataaaggtcgtatgaccgctgcaaaaatggctgaagtgctcaac
ggcattcgtcctacgctgtcctacggtgatttcggccacgtcgacctggtggtcgaagcg
gttgtcgaaaacccgaaggtcaagcaggcggtactggctgaagtggaagcccaggtcaaa
gatgacaccatcctggcctccaacacctcgaccatttccatctcgctgctggccaaggcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtgatccgtggcgagaagtccagcgagctggccgtggccaccaccgttgcc
tacgccaagaaaatgggcaagaacccgatcgtcgtcaacgattgcccgggcttcttggtc
aaccgcgtgctgttcccgtactttggcggtttcgccaagctggtcagcgccggtgtggac
ttcgtgcgcatcgacaaggtcatggagaagttcggctggcccatgggcccggcgtacctg
atggacgtggtcggtatcgacaccggccaccacggtcgcgacgtcatggctgaaggcttc
ccggaccgcatgaaagacgaccgccgctcggcgatcgacgcgctgtacgaggccaagcgc
ctgggccagaagaatggcaagggcttctacgcctacgaggccgacaagaagggcaagcag
aagaaagtggccgacccgtcggtgcacgaagtgctcgctccggtcatctacgaacagcgt
gaggtgtcggacgaagacatcatcaactggatgatgatcgccctgtgcctggaaaccgtg
cgttgcctggaagacggcatcgttgaaaccgccgccgaagccgatatgggcctggtgtac
ggtattggtttccctccattccgtggtggcgcgttgcgttacatcgattcgatcggtgtg
gccgagttcgttgccctggctgacaaatacgctgatttgggcccgctgtaccacccgacc
gcgaagctgcgtgaaatggccaagaatggccagagcttcttcggttaa
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