Pseudomonas fluorescens A506: PflA506_2000
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Entry
PflA506_2000 CDS
T02114
Name
(GenBank) putative diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pfc
Pseudomonas fluorescens A506
Pathway
pfc00300
Lysine biosynthesis
pfc00470
D-Amino acid metabolism
pfc01100
Metabolic pathways
pfc01110
Biosynthesis of secondary metabolites
pfc01120
Microbial metabolism in diverse environments
pfc01230
Biosynthesis of amino acids
Module
pfc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pfc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PflA506_2000
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PflA506_2000
Enzymes [BR:
pfc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PflA506_2000
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
AFJ58678
LinkDB
All DBs
Position
2185112..2186098
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AA seq
328 aa
AA seq
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MTRFYDARGNIYGVVSPAYLCRQGIAVPDTAGLAASTRKAWAASAIASECGWGSLPRPAG
AKAHRCDGLLVGPFQALPPFDLLIINTDGSLAERSGNGLTIFAQALTDQGLLVHGSELRV
YHDKPDAVSPVITCVEPAEHEQVPGFWLALGRPEFGPLAVGAVGVSPVAVGRHELSHVAA
LTSLNPQWGSSQFVRVGNPHCVTLVEQVSALPGCDTMHQSVLFKQLKAIAFAPPAGCGQP
CVGGVNLQWAARDAGNRIIARVFERGEGPTASSGTSASAVACAAWRAGWVEGGDVAVVMP
GGTAPVRLQIESGNVLSVSLFGTAQLKV
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgacccgattctacgacgcgcgcggcaatatctatggggtggtcagccccgcctattta
tgccgccagggtattgccgtgcccgacactgccggcttggctgcgagcacgcgtaaggcg
tgggccgcatcggcgattgcgtcggaatgtggttggggttcgttgccgcgtcctgctggt
gccaaggcgcatcgctgcgatggtttgttggtcgggccatttcaggccctgccaccgttt
gatctgctgatcatcaataccgacggctctctcgccgaacgcagtggcaatgggctgact
atctttgcccaagcgttgaccgaccagggtttgctggtccatggcagcgagttgcgggtg
tatcacgacaagccggatgcggtatcgcccgtaatcacctgtgtcgagccggctgagcat
gaacaggtgccaggcttctggctggccttgggccggcccgagtttggccccttggcggtg
ggggcggttggcgtgagcccggtggctgtggggcggcatgaactcagtcatgtggcagcc
ttgacgtcgctcaatccgcaatgggggagcagtcaatttgtccgggttggcaacccccat
tgtgtgacgctggttgagcaggtttcggcattgccaggctgtgacacgatgcatcagtcg
gtacttttcaagcagttgaaggccatcgcttttgcaccgccggcagggtgcggccaaccc
tgtgtcggtggggtcaacctgcaatgggctgctcgagacgctggcaatcgaatcatcgca
cgcgtatttgagcgaggagaggggcctacggcgtcctcggggaccagcgccagtgcagtg
gcgtgcgcggcatggcgagcaggttgggttgaggggggcgacgtagcggtggtaatgccg
ggtggcacggcgccagtgcgcttgcagatcgaatcaggaaacgtgctgagtgttagtctt
ttcgggacagcgcaattaaaagtctga
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