Pseudomonas fluorescens A506: PflA506_2115
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Entry
PflA506_2115 CDS
T02114
Name
(GenBank) Rhs family protein
Organism
pfc
Pseudomonas fluorescens A506
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
RNAse_A_bac
DUF6531
RHS
TEN_YD-shell
OCRE
Motif
Other DBs
NCBI-ProteinID:
AFJ56150
LinkDB
All DBs
Position
complement(2281345..2286048)
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AA seq
1567 aa
AA seq
DB search
MNPAIGRLALTPMNVETVDVEGVFRDFRDCLNTFDEWAKSFWSFSALDVEQVFKVGEDVA
LVAPVNRSLFPSSTVATCQATGALTLVHMFQSTRFVPIGNTPVIVQRVDPNGGPLGEPLH
KTIGPSGILEVTECDRNQQYRVSFYPNVSQDHLKALYASYQSVIAALEARLRKEWTDTFQ
AQWKNYADARPLERRRLLEAAFASGLGKALYSLWDNIGELSALLADLKPNSEKLLQYLSQ
TELDELLTLGSDAIAQGLLVLSDEPLLFIYLSALVSWMRMLPPPEMAELWGEITGEVLIN
LLLIRVLGAMGVMVRLGARVLSHVKSGRARALLELLAKQVVGPRLETHVEAAKPVLLSSA
ATPIKTVPAVPLKAGDTLVSNPVPMVRDKTQRTTLVRQEPVDDVPTVASNPKGDAAAPAD
KTVTHGCPVSMVTGEELLTLTDGALDGILPFEWTRLYRTSAVEVDCGLGLGWSHALAHRL
VVSGDSVVWTDHENRHTQFPLPSDSRPAITNSLAEAAIYLGSAPDELVLAQASRFYHFRD
GVLTAISDAYDNRLRICRDRSGRIERLDNGAGRSLLLRYELDRIVAVDYQVHRAKGREPY
VWETEQNLVSYAYDEHGRLVCATNAVGESERYRYDDQHVILERQLAGGASFFWEWERAGK
AARCVRHWASFSQMDTCYAWGDDGRVTVHNADGSQEVYVHDQRARLVQRIDPDGATHFKS
YDAKGRLTVEQDPMGAVTAYQYDDAGRLVVLFPGDDEPTSYEHDNGFVRVVRRGEAVWKY
ERNEQGDVTRRTDPDGEVTDYSYNKQGQLTGVWYPDSSCHRLVWNERGQLLEEQLPNGGI
KRYRYDDLGRQIAREDEHGAQTQYQWDAVGRLLKLIEPGGGCREFSYNPYGKIIAERDEL
GHVTRYEYADGLHLISRRFNADGTQVKYRYDNVRLLLTEIENEAGETYQLDYHPNGLIRQ
ETGFDGQRTVYAYDLNGNLLEKTEYGDDDSQLITRYQRDHAGRLVRKTLPDSSIVDYAYD
RQGNLLSVEDGHWALAYEYDRQNRLTAEHQGWGTLRYGYDACGQLKTLCLPDNNRLTFNH
DKGGHLATVELNGEVLTSHLFNSGREHQRQQGQLLSHYHYDDQHRLHAHAVTQQQNHLYQ
RQYDYDKSGNLTRLLDTRKGEHRYHYDPLARLTRADHSQDVQERFGHNPAGNLLMQDRPG
PDIVAANRLMIQGDRHYDYDAFGNLIRERRGKGQQLVTEYRYDCQHRLISITKPNGETAS
YRYDPFGRRISKTVDDKTTEFFWQGDKLIAEHHAERHRSYLYEPGSFRPLALLDGFGPKE
TKPYHYQLDHLGTPQELTSPEGEIVWSAHYRAYGQIARLDVGNIDNPLRFQGQYFDAESG
LHYNRHRYYNPDIGRYLTPDPVKLAGGINGYRYVPNPTGWVDPLGLSCKKTSCPEGPYSV
IVPGGGLAAHEAAGGHLMQKHVGRTDQQLLDRLRQEPHIPAASTFHDRATAELAVSKVLD
NNQDKIKDFLEGNNQQIVITQLSPEPIGTSFKKNTTTPVPGKEIYLIIRRDQKMHTGYRI
HTGFPNP
NT seq
4704 nt
NT seq
+upstream
nt +downstream
nt
ttgaacccggccattggcaggctggcgctgacgccaatgaacgtggaaacggtcgacgtt
gagggcgtcttccgtgactttcgcgattgcttgaacacctttgacgagtgggccaaaagc
ttttggagcttctccgcgctggacgtcgaacaggtgttcaaggtcggggaagacgtcgcg
ctggttgccccggtcaatcgctcactgtttcccagcagcaccgtcgccacctgccaggcc
acgggtgccttgaccctggtgcatatgttccagagcacgaggttcgtacccatcggcaac
accccggtgatcgtgcaacgcgttgatccaaacggcggcccgctgggcgagcccctccat
aagaccatcggcccgagtggcatcctcgaagtcaccgagtgtgatcgcaaccagcaatac
cgggtgagtttctaccccaacgtttcccaggatcacctcaaagcactgtatgcgtcctac
cagtcagtgatcgcagcgttggaagcccggctgcgcaaagagtggaccgacaccttccag
gcccagtggaaaaattatgcagacgcccgcccgcttgagcggcgccgcttgctggaagcg
gcttttgccagtgggttaggcaaagcgctttacagcctgtgggacaacattggcgagctg
tctgcgctgctggcggacctcaagcccaacagcgaaaaactgctgcaatacctttctcaa
accgagctcgatgaactgctgacactgggcagtgatgcgatagcccaaggcttgttggtg
ctcagtgatgagccgctgctgtttatctacctgtcggcgctggtcagctggatgcgcatg
ctcccgccaccggagatggctgaactgtggggtgagattaccggtgaggtgctgatcaat
ctgctgctgattcgcgtgttgggtgcgatgggcgtgatggtgcgattgggggctcgtgtg
ctcagtcacgtcaaatccgggcgggcgcgggcgttgttggaattgctggccaagcaagta
gtggggcctcggctggaaacccatgtggaggccgccaagccggtgttgctgagcagtgcg
gcgacgccgattaagacggtgccggctgtgccgttgaaggcgggcgatacgctggtttcg
aacccggtgccgatggtgcgcgacaagacccagcgcacgacgttggtccgtcaggagcct
gtcgatgatgtgccaactgtggcgtcgaatccgaagggcgatgcggcggcgcctgcggat
aaaacagtcactcacggctgcccggtgtcgatggtcaccggcgaggaattgctcaccctc
accgacggcgcgctggacgggattttgccgtttgagtggacacggctgtatcgcactagc
gcggtggaggtcgattgtgggctggggttgggttggagccatgcgctggctcatcggctg
gtggtgtcgggcgattcggtggtgtggaccgatcatgagaaccgccatacgcagtttcca
ttgcccagcgactctcggcccgcaatcaccaatagcctggctgaagcggcgatctatttg
ggttcggcgcctgacgagttggtgctggcccaagcgtcacggttctatcactttcgcgac
ggtgtactgactgcgatcagcgatgcgtatgacaaccgtctacgcatttgccgtgatcgt
tccgggcggattgagcggctggataacggcgcgggtcgctcgttgctgttgcgttatgag
ctggatcgcatcgttgcggtggactaccaggtgcatcgcgccaaagggcgtgagccctac
gtgtgggagaccgagcagaaccttgtttcctacgcctatgacgaacatggacgactggtt
tgcgcgaccaatgctgtcggtgaaagcgagcgttatcggtacgacgatcagcacgtcatt
cttgagcgccaactggccggtggcgcgagtttcttctgggaatgggaacgcgcgggcaag
gcggcgcgctgtgtgcggcattgggcaagtttttcgcagatggacacgtgttacgcctgg
ggggatgacgggcgtgtcacggtgcataacgccgatggtagccaggaggtgtatgtccat
gaccagcgggcgcggttggtgcagcgcatcgatccggacggcgccacgcactttaaatcc
tacgatgccaagggccggctgaccgtcgagcaagacccgatgggcgcggtgacggcctat
caatatgacgacgccggacgcttggtggtgctgtttccgggggatgatgagccgacttcc
tacgaacatgacaacggttttgttcgggttgtcaggcgtggggaggcggtctggaaatat
gagcgtaatgagcaaggcgatgtaacgcgtaggaccgatcccgatggtgaggttactgac
tacagctacaacaaacagggacaactgaccggtgtttggtatcccgacagcagttgccat
cggctggtgtggaacgagcgtgggcagttgcttgaagagcaattgcccaacggcgggatc
aagcgttatcgctatgacgatctaggccggcagattgcgcgtgaggatgagcatggggct
caaactcaatatcaatgggatgccgtagggcgtctgctaaagctgatcgagcccggtggt
ggatgtagggaattcagctacaacccctacggcaaaatcatcgccgaacgcgacgaactg
ggccacgtcacccgctacgaatacgccgatggcctgcacctgatcagccgccgcttcaac
gccgacggtacccaggtcaagtatcgctacgacaacgtgcggctgctgctcaccgagatc
gaaaacgaagccggcgaaacctaccaactcgactaccaccccaatggcctgatccgccag
gaaaccggcttcgacggccagcgcaccgtctacgcctacgacctcaacggcaacctgctg
gaaaagaccgaatacggcgacgatgacagtcagctcatcacccgctaccagcgcgaccac
gccgggcgcctcgtccgaaaaaccctgcccgattccagcattgtcgactatgcctacgac
cgccaaggcaacctcctcagcgtcgaggacggccactgggcgttggcctacgaatacgac
cgccaaaaccgcctcaccgccgaacaccaaggctggggcaccctgcgctacggctacgac
gcctgcggccagctgaaaaccctgtgcctgccggacaacaaccgcctcaccttcaaccac
gacaaaggcggccacctcgccacggtcgaactcaacggtgaagtactcacctcacatcta
ttcaacagcggccgcgaacaccagcgccagcaaggccaactgctcagccactaccactac
gatgaccaacaccgcctgcacgcccacgcggtgacccaacagcaaaaccacctctaccaa
cgccaatacgactacgacaaatccggcaacctcacccgcctgctcgacacccgcaaaggc
gaacaccgctaccactacgaccccctcgcccgcctgacccgcgccgaccactcccaagac
gtacaggaacgcttcggccacaaccccgccggcaacctgctgatgcaagaccgccccggc
ccggacatcgtcgcggccaaccgcctgatgatccagggcgaccgccattacgactacgac
gccttcggcaacctcatccgcgaacgacgcggcaagggccagcaacttgtcactgagtac
cgctacgactgccagcatcgattaatcagcatcacaaagccgaacggcgaaaccgccagc
tatcgctatgacccatttggacgccgcatcagcaaaaccgtggacgacaaaaccaccgag
tttttctggcaaggcgacaagctaattgccgaacaccatgcagaacgccatcgcagctac
ctctacgaacccggcagcttccgcccactggcactgttggacggtttcggcccaaaagaa
accaagccctaccactaccaactcgaccacctcggcaccccgcaggaactgaccagcccc
gaaggcgaaatcgtctggtccgcccactaccgcgcctacggccagatcgcccggctcgac
gtaggcaacatcgacaacccgttgcgcttccagggtcagtatttcgatgcggaaagcggc
ctgcactacaaccgccatcgctactacaatccggatattggtcgttacctgacgccggac
ccggtgaagttggcgggggggatcaatgggtaccggtatgtgcccaatccgacaggttgg
gtagacccgctgggacttagctgtaaaaaaacaagctgccctgaagggccgtatagcgta
atcgttccaggaggaggtttagccgcacatgaggcggcaggaggacatctaatgcaaaag
catgtcggtagaactgatcaacagctgcttgaccgcttgagacaggaaccacatatcccg
gcagcctctacgtttcatgatcgcgcaacagctgaactcgccgtttcaaaggtattggat
aacaatcaagacaaaatcaaagacttcctagaaggaaacaaccagcagatagtcatcact
caactatccccagagccaatcggcacaagtttcaaaaagaacactacgacacctgtaccc
ggaaaagaaatttacttaattattcgcagagaccaaaaaatgcatactggatatcgaatt
cacacagggtttccaaacccatga
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