Pseudomonas fluorescens A506: PflA506_2220
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Entry
PflA506_2220 CDS
T02114
Name
(GenBank) RNA polymerase sigma factor, FecI family
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pfc
Pseudomonas fluorescens A506
Pathway
pfc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pfc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PflA506_2220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfc03021
]
PflA506_2220
Transcription machinery [BR:
pfc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PflA506_2220
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Sigma70_ECF
PhyR_sigma-like
HTH_24
GerE
HTH_11
TnsD
HTH_Tnp_4
HTH_7
LacI
HTH_10
Motif
Other DBs
NCBI-ProteinID:
AFJ57641
LinkDB
All DBs
Position
complement(2389056..2389571)
Genome browser
AA seq
171 aa
AA seq
DB search
MSESLPADNTPHLRAIEALYSGHHGWLYATLKRKLGNAMDAADLAQDTFTRILASQVTVI
DQPRAYLSCVAKGILVNWYQRKALERAYLEALASVPAHEVPSPEAHFLVLETLHEIDAML
DALPPLVKRAFLLSQLNGLKYQDIAEQLGVSLITVKRYMKQALVQCLMRVE
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaagccttcccgccgataacacccctcacctgcgcgcaatcgaggcgctgtac
agcggccatcacggctggctgtacgccacgctcaaacgcaaactcggcaatgccatggat
gcggcggacctggcccaggacaccttcacccgcatcctggcctcgcaggtcacggtgatt
gaccagccacgcgcctacctgagctgcgtggccaagggcatcctggtcaactggtaccag
cgcaaggccctggaacgtgcctatctggaagcgctcgccagcgtgccggcccacgaggtg
ccgtcgccggaagcgcactttctggtgctggagaccctgcacgaaatcgacgcaatgctt
gacgcgctgccgccgctggtcaagcgtgcgttcctgctgtcgcagctcaacggcctcaaa
taccaggacatcgccgagcaattgggcgtgtcgctgattaccgtcaagcgctacatgaaa
caggcactcgtccagtgcctgatgcgggtggaataa
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