Pseudomonas fluorescens A506: PflA506_2328
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Entry
PflA506_2328 CDS
T02114
Symbol
dapF_1
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pfc
Pseudomonas fluorescens A506
Pathway
pfc00300
Lysine biosynthesis
pfc00470
D-Amino acid metabolism
pfc01100
Metabolic pathways
pfc01110
Biosynthesis of secondary metabolites
pfc01120
Microbial metabolism in diverse environments
pfc01230
Biosynthesis of amino acids
Module
pfc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pfc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PflA506_2328 (dapF_1)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PflA506_2328 (dapF_1)
Enzymes [BR:
pfc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PflA506_2328 (dapF_1)
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
AFJ57640
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Position
2524825..2525628
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AA seq
267 aa
AA seq
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MTLPFVKMHAHGDDFIIIDRRGEDNPITAQIARHLGNRRTGIGFNQLAVVLDCEEAAARV
QFWNPDGTRLQTCGSATRGVADRLMHEAGTQSIVLGSDRGLLTCTRADGQRVSVDMGPPS
LDWASVPLARAMDTCVLPIDGQPAACSMGNPHCTFFVEDVTALDIEAMGSTLEVHPLFPA
RTNVHFVQVLDRGHIRLRIWERGGGVPLGSGSCCCAAVVNGIRRGLLDERVEVQCDGGAV
TVQWDGRGGVILTGRVEPIMQGTAYLY
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgaccctgccgttcgtgaagatgcacgcccacggcgacgacttcattatcattgaccgc
cgtggcgaggataaccctattactgcgcagattgcccgccacttgggtaaccgccgcacc
ggcatcggtttcaatcagctggcggtggtgctcgactgtgaggaggctgctgcgcgcgtt
cagttctggaacccggacggaacacgcttgcaaacctgcggcagcgcgacgcgtggcgtg
gcggatcgcctgatgcatgaggctggcacccaaagcatcgtgctgggcagcgaccgtggc
ttgctgacatgcacacgtgctgatgggcagcgcgtgtcggtggatatgggcccaccctcg
ctggactgggcgtcggtacccttggccagggcgatggacacctgcgtgttgcctatcgac
ggccagccggcggcgtgcagcatgggcaacccgcattgcacgttttttgtggaggatgtg
acggcgctcgatattgaagccatgggctcgaccctggaagttcacccgctgtttccggcc
aggaccaatgtgcatttcgtgcaagtgctggaccgcggccatatccgcctgcgtatctgg
gagcgtggcggaggtgtgccgctggggtccggttcatgctgttgcgcggcggtcgtcaac
ggcatccggcgagggctgctcgatgagcgtgtggaggtccagtgcgacggcggcgcggtc
acggtgcaatgggacgggcggggcggggtgatattgaccggccgggtcgagccgatcatg
cagggcaccgcgtacctgtactag
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