Pseudomonas fluorescens A506: PflA506_2419
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Entry
PflA506_2419 CDS
T02114
Symbol
tssM2
Name
(GenBank) type VI secretion protein TssM2
KO
K11891
type VI secretion system protein ImpL
Organism
pfc
Pseudomonas fluorescens A506
Pathway
pfc02025
Biofilm formation - Pseudomonas aeruginosa
pfc03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pfc00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PflA506_2419 (tssM2)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PflA506_2419 (tssM2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pfc02044
]
PflA506_2419 (tssM2)
Secretion system [BR:
pfc02044
]
Type VI secretion system
Imp/Vas secretion system core components
PflA506_2419 (tssM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IcmF-related
IcmF-related_N
IcmF_C
IcmF_helical
Motif
Other DBs
NCBI-ProteinID:
AFJ54830
LinkDB
All DBs
Position
2634720..2638085
Genome browser
AA seq
1121 aa
AA seq
DB search
MIAFFKGVGTVLGRIWVWSLLLVLSCAAMVWFLGPLLAVDDHRIWAGATARLVTISGVFL
LWGLAMAFVGPGFAAWRQRPEREVRRQPMTRVEDERRHLRSRFKKAVHLLKISRHYGERN
ARWRHELPWYLLIGEPGSGKTQLLAAAGLPLALDHAQTRPIGSSAHCDWYFGDEGVLIDT
PGRYLTQPDSSVDAAGWITLLHLLRWRRRVRPLSGVVVTLSVDMLSSTNEYDLDHHARHV
HSRLQEIQQTLHVDVPIYLVLTHADRLPGFAEFFDSPLGESADSVLGQHLQGCADGTDTT
QVRQAVEQLLQRLNSELIGRLHQERNVERRGQMLEFPQQAARMGERVSLFVDMAFCAHRY
QPINGLRGFFLTCADGRHPRFVQGLFSQVISAEADLAGLQAQEQQRLRWRQGAQAVAAAL
VIGGVGGLWGHSYSVNHQRLAQLSALTSHPPLALAADDESTALLALLDARLAATQVFPGP
ADVRLVERTGLYQGELSRPSVDQAYDHALQKPFLAWTAAQLEEQVIASLGDRERLLDDLR
AYLMLNLRERRDTTWLAEHIASLWSVRFAGDMPTQKRLNVHLARLLEQPFVVSLNAERVA
QAREALRGESLADGVYRVLREQARSLEPLRLAEGKVFAAIDPPVPGFYTKRYVQYFEAQG
PRLVNAITQDNWVLGEGTDLGTEDLRRLMAELQQRYFSEYADAWSDALGRVSLQETDNLR
QDAEQLMNLTSAQSPLIRLLQQVRENTRLLPSHGLLDKVAQQSADLGEMAKSRLTAGQAG
IVEAPRRALQRRFEPLHQLLDEQQNPGVELTQALRLLDEVHLHLTALNRDSAPEQAAFLR
ARQRMEGQQDALGHLRDAAARLPLPVAGWLESMADDSWRHLLEQAYVHVNQRYQSEVHSL
YAKAIGRRYPFNAHASSEVALHDFQEFFKPRGVMARFYEGYLRPFISADGSRYRLRGLDG
QSLPVSRALLEQLMKIQVIRRGFFTEDAGELSVRFTLAPNSLDPSVSRAILRFGDQQLEY
RHGPIVPMTFHWPTDADNGRSSLVLERGAEQRPLGIEKDTGAWSLFRFLDLLQKEPASGR
NIQILKADLAGLRANYRLTSQRTPGPFDMDTWRTFRLPEQL
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcattcttcaagggggtgggcaccgtgctgggcaggatttgggtgtggagcctg
ttgctggtgctttcctgcgcggcaatggtgtggttcttggggccgctgctggcagtggat
gatcaccgtatctgggccggggcgactgctcggttggtcaccatcagcggtgtgttcttg
ctatggggactggcgatggcgtttgtgggcccaggttttgccgcctggcgccaaagacca
gaacgcgaggtgcgccgacagccgatgacgcgggtggaggacgaacgccggcacctgcgc
agtcggttcaagaaagccgtgcacctgctcaagatatcccgccattatggagagcgtaac
gcgcgttggcgtcatgagttgccctggtacctgttgatcggtgagccgggcagtggcaag
acacagctgctggcggcagcgggcttgccgctggcgctggaccacgcgcaaacgcggccg
atcggtagcagtgcccattgtgactggtatttcggcgacgaaggcgtgctgatcgacacc
ccgggacgctaccttacccagcccgactcttcagtggacgccgcaggctggatcaccttg
ctgcatctgctccggtggcgccgtcgagtgcggccgctcagcggtgtggtggtgacgcta
tcggtcgacatgctgtcgagcaccaacgaatacgacctggatcatcacgcacgccatgta
cactcgcgcctgcaagagatccaacagacgttgcatgtggatgtgccgatttacctggtg
ttgacccacgccgaccgattgccgggattcgctgaattctttgactcaccccttggagaa
agtgccgacagcgtgttgggtcagcacctgcaaggttgcgccgacggtactgacacaaca
caggttcgtcaggcggtcgagcaattattgcagcgcttgaacagtgagctgattgggcga
ctgcatcaggagcgcaatgtcgagcgacgtgggcagatgctggagtttccccagcaggca
gcacgaatgggggagcgcgtcagcctgttcgttgacatggcgttttgcgcacatcgctac
caacccatcaacggtttgcgagggttcttcttgacctgcgccgatggcaggcacccgcgc
tttgtgcagggtctgttcagccaggtgatctccgccgaggccgaccttgcgggtttgcag
gctcaggaacaacaacgtctgcgttggcgccagggcgcgcaggcggtggctgcagcgctg
gttattggcggtgtcggcgggctatgggggcacagttactcagtcaaccaccaacgcttg
gcgcaattgtcggcgctgacctcacacccgccgctcgcccttgcggccgacgatgaaagc
acggcgctgttggcgctgttggacgcgcgactggcggcgacccaggtttttcctgggccg
gcagatgtacgcctggtggagcgcaccgggctgtatcagggcgaactgagccgtcccagc
gtcgatcaagcctatgatcacgcgctgcaaaagccatttctggcctggacagccgcccag
ttggaagaacaggtaattgccagcctcggggaccgggagcggctgctcgacgacctgcgt
gcctacctgatgctcaatctgcgcgaacgccgtgacacgacctggctggcagaacatatt
gcaagcctttggtcggtgcggtttgccggggatatgccaacacagaagcgcctcaatgtg
caccttgcgcggctgctggagcaaccttttgtggtgtcactcaacgcggagcgggtggcc
caggcccgtgaagcgctgaggggcgaatcgttggccgatggggtctatcgggtattgcgc
gaacaagcgcgcagcctggagccgttgcggctggccgagggtaaggtgttcgccgctatc
gatccgcctgtgccggggttctataccaaacgctatgtgcagtactttgaggcgcagggc
ccgcggttggtaaacgccatcacccaggacaactgggtgctcggcgagggtaccgacctg
gggaccgaggacttgcggcgcctgatggctgaactgcagcaacgttatttcagcgagtat
gccgatgcctggagcgatgcgcttggccgagtcagtctgcaagagactgacaacctgcgc
caggatgccgagcaactgatgaacctgacgtcggcgcaatcgcctttgattcgtctcttg
caacaggtgcgtgaaaatacgcgtttgttgccaagccatggactgctggacaaagtggcc
cagcagtcggcagacctgggcgagatggccaagtcgaggttgacggcggggcaggcgggt
attgtcgaggctccgcggcgcgccttgcagcgccgctttgagcctttgcatcaattgctg
gatgagcagcagaaccccggcgtagagctgactcaggccttgcgtctgctggatgaagtg
cacctgcatttgacggccttgaaccgggacagcgcacccgagcaggccgccttcctgcgt
gccaggcagcgcatggagggccagcaggatgcattgggccatctgcgagacgccgccgct
cgcctgccgctgcccgttgccggctggctcgaaagtatggcggatgacagttggcggcat
ttgctggaacaggcctatgtgcacgtcaaccaacgttatcagagcgaggtgcatagcctt
tatgccaaggccattggccgacgttacccattcaatgcgcacgccagcagtgaggtcgcc
cttcacgattttcaggagttcttcaagccacgcggggtgatggcgcgcttttatgagggc
tacctgcggccttttatcagtgccgacggcagccgctaccgattgcgtgggctggatggc
cagagtttgccggtttcccgtgcgctgctggagcaattgatgaagatccaggtcatccgc
cgcggcttttttaccgaagacgcgggggagttgtccgtgcgattcaccttggcacccaac
agcctggacccatcggtcagccgagcgatcctgcggtttggcgaccagcaattggagtat
cgccacggtccgatcgtacccatgacgttccattggcccaccgacgcagacaatgggcgc
agcagcctcgtcttggagagaggcgcggagcagcgccccttgggcatcgaaaaagacact
ggagcgtggtcgttgttccggtttctggacctgctgcagaaagagcccgccagcggccgt
aatatacagatcctcaaggcagacctcgccggcctgcgcgccaattaccggctcaccagc
cagcgtacgcccggtccgtttgacatggacacatggcgcacctttcgcctgccggagcag
ctgtga
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integrated database retrieval system
